Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02939 ATGTCATTGATTATATCTCCGGAGCTGGCCGATACATCGTATAGGAATGCCAAGCTATACTCGTTAAAGGGAACCGACGTTACACCTGGCCTGTCCTCGCATAATTTTGCTCCTGATAAGCACAAAAGCATGTACATGAATGATTCTTACTCGAGCGAGAGTTACGAAAAATACTTCCGTGATTCACCTACAGAAGAACTGATAGAACCGTCTAGTTCTGGCATATCGGGAAATTCAGTTCACGCTGATGGTGATTCTCCTTACCAGCTCAGAGCTAGTTCAGGAGCATCTATGGTTACTGATAACGCAACTGATACTTATATTTCGTCTACAAGGCACTGTGATGCCTATCAGTCCAACTTTGAATCAGATTTCTTGGAGAATGAGAGCCCGGATTGTTTTGAATTCGATGGTGAAATGCGATTGAAACTACAAGAATTGGAGAGGGCATTGCTTGGTGACAATAATGATGAGTGCGACGACGATGAAGAAAACATATTTAGGACTGTACAGAGCATGGAGATTGATCCTGACTTTGCCGACTGTGCCAATCCTATTCAGAACATGTTGAGTCATGACTCGCCAAAGGAATCTTTGTCCTCAGAGTCCAATCTCAGTAGCAGCAGTAGCACCAAAGAAATATCACAAAACTTTCCTCGGACCCCAAAGCAATTACTTTATGAATGTGCTAGTGCACTTTCAGATGGAAATGAAGTAAAAGCCTCGGCGATGATAGATGATCTAAGGCAGATGGTTTCGATTCAAGGAGATCCTTCCGAAAGAATTGCAGCCTACATGGTGGAAGGACTCGCTGCTCGGATGGCTTCGTCTGGAAAATCTATGCAGATACTGTTCGAGGTGTGCCCGTGTTTTAAATTCGGATTCATTGCTGCAAATGGTGCTATTTCTGAGGCTGTTAAAGATGATAAGAAGGTTCATATAATAGATTTTGATATCAACCAAGGAAGTCAATATATAACTTTAATACAAACACTTGCTTCTCGGCCAGGGAAGCCACCTTATGTTAGATTGACCGGCGTTGATGATCCTGAGTCCGTGCAGCGATCCGTTGGAGGCCTAAGTACGATAGGACAAAGACTTGAAAAGCTAGCAGAAGTACTTGGATTGCCATTTGAATTTCGAGCCGTAGCATCTAGCTCTTCAATTGTCACTCCATCAATGCTCAACTGTCGTCCTGGTGAATCGCTCATCGTAAACTTTGCATTCCAGCTTCATCACATGCGCGACGAAAGTGTATCGACAGTAAACGAACGAGACCAGCTTCTTCGCATGGTTAAGAGCCTTAATCCAAAACTCGTAACAGTTGTTGAACAAGATGTGAACACTAACACCTCCCCGTTTCTCCCGAGATTCGTTGAAGCATACAATTACTACTCTGCTGTGTTCGAGTCGCTCGATGCAACTCTTCCAAGAGAGAGTCAGGATAGGGTGAATGTTGAAAGGCAATGCTTGGCAAGGGATATTGTCAATGTGATCGCGTGCGAGGGCGAGGATAGAATAGAACGGTACGAAGTTGCCGGGAAATGGAGGGCAAGGATGAGAATGGCTGGGTTCACTTCATCACCAATGAGCACAAATGTGAAAGAAGCAATTAAGGAACTCATTAGGCAATACTGTGACAAGTACAAGATAAAAGAAGAAATGGGGGCACTTCATTTTGGTTGGGAAGACAAAAACTTGATTGTTGCTTCAGCATGGAAGTGA 1725 0.4365 MSLIISPELADTSYRNAKLYSLKGTDVTPGLSSHNFAPDKHKSMYMNDSYSSESYEKYFRDSPTEELIEPSSSGISGNSVHADGDSPYQLRASSGASMVTDNATDTYISSTRHCDAYQSNFESDFLENESPDCFEFDGEMRLKLQELERALLGDNNDECDDDEENIFRTVQSMEIDPDFADCANPIQNMLSHDSPKESLSSESNLSSSSSTKEISQNFPRTPKQLLYECASALSDGNEVKASAMIDDLRQMVSIQGDPSERIAAYMVEGLAARMASSGKSMQILFEVCPCFKFGFIAANGAISEAVKDDKKVHIIDFDINQGSQYITLIQTLASRPGKPPYVRLTGVDDPESVQRSVGGLSTIGQRLEKLAEVLGLPFEFRAVASSSSIVTPSMLNCRPGESLIVNFAFQLHHMRDESVSTVNERDQLLRMVKSLNPKLVTVVEQDVNTNTSPFLPRFVEAYNYYSAVFESLDATLPRESQDRVNVERQCLARDIVNVIACEGEDRIERYEVAGKWRARMRMAGFTSSPMSTNVKEAIKELIRQYCDKYKIKEEMGALHFGWEDKNLIVASAWK 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02939 574 MobiDBLite consensus disorder prediction 187 218 - -
Car04g02939 574 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 573 IPR005202 -
Car04g02939 574 MobiDBLite consensus disorder prediction 184 218 - -
Car04g02939 574 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 10 573 IPR030011 GO:0003700|GO:0005634
Car04g02939 574 MobiDBLite consensus disorder prediction 66 83 - -
Car04g02939 574 Pfam GRAS domain family 223 574 IPR005202 -
Car04g02939 574 ProSiteProfiles GRAS family profile. 213 574 IPR005202 -
Car04g02939 574 MobiDBLite consensus disorder prediction 66 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02939 Car-Chr4 56588867 56590671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02939 1 574 GRAS Transcription Factor Family AT1G21450 59.567 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car04g02939 GRAS 2.1e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02939 - - gmx:100807048 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02939 04 56588867 56590671 Car04g02939 04 56588867 56590671 ECH
Car04g02939 04 56588867 56590671 Car05g02229 05 67507222 67510293 PCT