Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02932 ATGAATGTGTTCCAAAAAATGCATAACCAAAATTCACTGTTCCTTCCTTTCATTCTCTTCACCTTTTTCATATTTTCTTCTTCTTTTGCTGCTACAATATCTTCATCATCATGTCCTATGGATCTAAGCTATGTTGAAACATTTCCATGGGACACATCAACATGTAGAGACCCAATTGATACACAACATTGTTGCCAATCACTTCTTAGTCTCTTTGGCATAGGCCTTGCACAACACCTCAAAGAAACTTCCCTCTTTCAACTCCCTAATGAAAATACTTCCACAAATTGCTTACAAGACTTCAAACTCAAACTCTCATCTTTGAAAATCCAACCATCATTAGTCCCTTCTTGTTTCCAAAACTCAACTCAGTTTGTCACAAACTCATCAAGCTGTGCTGGCATAAAAAACATTCAAGATTGGAAGCAAAAAGTTGGAATTTTTAGTCCTTTAGACACTTCTTGTGATGGTGATTTGAGTGATGAATCTAAGTGTAGCATTTGTACTGAATCTGGCTTCAAAGTCACTTCACAGCTTAATGCTATTGACCCAAATGCAACAAAGTGCTTTTACTTCACAATTTTGTATGCTACTGCTATTGTTAACAAATTTGGTCCTACAGATGTTGGAACAGCTGGTTGTATACTTGGTTTGCCACTTTCAACAAAAGGGTCATCAAATAAAGATCAAATTTTGAAACTTGTTTTTGGGTTATTAGGTGCTTTTGTTGGTGTTGTTTTAGCTTTTGTGCTTATAGTTATGTACAAAAAATGGAACAAAATGAGAAGAGAAAACATTTATCATAGATCAGTTGAGAATAGTGTGAGAGACAGTGTTTTGCCTAATACAGGTTCAAAATGGTTTCACATATCAGAACTTGAAAAAGCTACAAACAAATTTTCACAGAAGAATTTGATTGGTCAAGGTGGTGATGGAGTTGTTTACAAAGGAACACTTTCAGATGGTACTTTAGTTGCTATCAAAGAAATTTTTGATTTGGATACAAGAGGTGATGAAGAGTTTTGTTATGAAGTTGAGATTATAAGCAAAATCAAGCATAGGAATCTTGTTGCATTAAGAGGTTGTTGTGTTGCAAGTCATAATTTAAGAGGTAAGAGAAGGTTTTTAGTTTATGATTATATGCCTAATGGAAGTTTAAGTTATCAATTATCAATTAATGGTGCTAATAAGCTTACTTGGCCACAAAGAAAGAATATTATTCTTGATGTGGCAAAAGGGTTAGCTTATTTACATTATGAAATTAAGCCACCAATTTACCACCGTGACATTAAAGCTACAAACATACTTTTGGATTCAAAAATGAGAGCTAAAGTTGCTGATTTTGGATTAGCAAAACAAGGGAATGAAGGACAAACTCATTTAACAACAAGAGTAGCTGGAACATATGGTTATTTAGCACCTGAATATGCATTATATGGACAATTAACTGAGAAAAGTGATGTATATAGTTTTGGTATAGTAATACTTGAAATAATGAGTGGAAGAAAAGTGCTTGATACAATGAACTCACCTGTTGTTTTGATAACTGATTGGGCTTGGACACTTGCAAAAGGAGGGAAAGTTTGTGAAATATTTGATGATAAAGTTAGAGATGAAGGGCCAGAGAAAATCATGGAAAGGTTTGTACTTGTTGGAATTTTATGTGCTCATGCTATGGTTGCATTAAGGCCTACTATTGCTGAGGCATTGAAAATGTTGGAAGGTGATATTGATATTCCTACTTTGCCTGATAGACCTGTTCCACTTGGTCATGAATCTTTTCAATCTTCACTTTTTAATGGTTTGCAATCTAGTGGAAGATCAACACCTTATTATAATTCTTCATTTTATTCCACTACTAGTATGAATACTATTAGTTAA 1881 0.3397 MNVFQKMHNQNSLFLPFILFTFFIFSSSFAATISSSSCPMDLSYVETFPWDTSTCRDPIDTQHCCQSLLSLFGIGLAQHLKETSLFQLPNENTSTNCLQDFKLKLSSLKIQPSLVPSCFQNSTQFVTNSSSCAGIKNIQDWKQKVGIFSPLDTSCDGDLSDESKCSICTESGFKVTSQLNAIDPNATKCFYFTILYATAIVNKFGPTDVGTAGCILGLPLSTKGSSNKDQILKLVFGLLGAFVGVVLAFVLIVMYKKWNKMRRENIYHRSVENSVRDSVLPNTGSKWFHISELEKATNKFSQKNLIGQGGDGVVYKGTLSDGTLVAIKEIFDLDTRGDEEFCYEVEIISKIKHRNLVALRGCCVASHNLRGKRRFLVYDYMPNGSLSYQLSINGANKLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMRAKVADFGLAKQGNEGQTHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEIMSGRKVLDTMNSPVVLITDWAWTLAKGGKVCEIFDDKVRDEGPEKIMERFVLVGILCAHAMVALRPTIAEALKMLEGDIDIPTLPDRPVPLGHESFQSSLFNGLQSSGRSTPYYNSSFYSTTSMNTIS 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02932 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Car04g02932 626 ProSiteProfiles Protein kinase domain profile. 300 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02932 626 Pfam Protein kinase domain 301 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02932 626 Gene3D Transferase(Phosphotransferase) domain 1 381 579 - -
Car04g02932 626 Gene3D Phosphorylase Kinase; domain 1 261 380 - -
Car04g02932 626 SMART serkin_6 300 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02932 626 PANTHER OS01G0253100 PROTEIN 24 601 IPR045271 GO:0004714|GO:0006468
Car04g02932 626 SUPERFAMILY Protein kinase-like (PK-like) 284 592 IPR011009 -
Car04g02932 626 CDD STKc_IRAK 306 575 - -
Car04g02932 626 Pfam SPARK 34 189 IPR043891 -
Car04g02932 626 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 24 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02932 Car-Chr4 56478710 56480762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02932 31 595 Receptor kinase-like Gene Family AT1G11050 53.333 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Car04g02932 Pkinase 1.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02932 - - ccaj:109788171 971.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02932 04 56478710 56480762 Car04g02932 04 56478710 56480762 ECH