Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02924 ATGTTCACCGCATGCGACGGAGCCCGTACTGTTGTGGTCGCCGTCAAGATGGAATCTCACACTCACTCTATACAGTTGCTTACGTGGTCGTTGGTTAATGTCGCTCGACCTGGTGATCTTCTTCTCGCTCTTCATGTTCTCAGAAATGATGAAATTGTGAATCGAGATGGAAAATCTTCTCTGTTTTCTCTTGTCAAAGCATTCGACTCTGTTCTTTCTGCTTATGAAGGATTCTGCAATTTGAAACAGGTGGATTTGAAGCTAAAAATTTGCCGGGGTTCATCAGTGAGGAGAATTCTTGTTAGAGAAGCAAATGAATATTGTGCAAGTCATGTTATAGTTGGAAAACCACAAGGTCTTAGTAAAATTAGGCCATCTATTTCTATAGCTAGGTACTGTGCTAAGAAGTTATCAAAGGATTGTTGTGTTCTTGCTGTTGATAATGGGAAAGTTGTGTTCAAGAGAGATGGTTCACCGACAAATCGAGCTGACATAAAAGGTCGAATTGGATTTCTCGGTTCGATTCAATGGACGCTAAGCAAGAGTTCAAAAGTACTAAATGATGATATGCATGAAAAGGGTACTAATGAAAAGATTTCAGATCAGAGGTTGGTTAATCTTTTTATGGATTGTAAGGAAGTCATTGGAGGGAAGAAGAGTTTCTCGATTTTTGATTCGACCGCAGCGATATTGCCAGAGTCGTTTTGCCGTCAAGCTGCAGATCAAGAGTCTTTTTGTGATGGTGCCGGTAATAGTGAGAAGTACTCATTGGCTTTGGTGCCTGTAAAGGTCAGTGATGCTGATTGGAAACCTGGTTGGCCACTACTACATAGTAAAATTTCATTACCAAACAGAAAATCTTCTGAAAGATCCTCGTTTCATCGAATCTCTGTGGTCCAGTGGGCGATGCAGTTGCCCTCCAGAGATCTTTATTATGCTGCAAATGATAATAAAGATCAAATTTTGGGTCTAGATAGCAAAAGTGGTGCTCTTGTTCCGGTGGATACTGAAATCGGGATTGTTGCTTCACCTGAACACGAATCGAGAAGCATTCCAAAAGAATTGGAGGGTCTTCATGAGAAATATTCATCTACTTGTAGATTGTTTATGTACCAAGAACTTGTATCAGCAACATCAAATTTCTTGCCTGAAAATTTGATCGGGAAAGGAGGAAGTAGTCAGGTTTATAGAGGCTGTCTTCCTGATGGCAAGGAACTTGCTGTTAAGATCTTAAATCCTTCTGATGATGTTTTGAAGGAGTTTGTTTTAGAGATTGAAATTATTACTGCTTTACATCATAAAAACATCATTTCCCTCCTTGGATTCTGCTTTGAAGATGACAATCTTCTTTTGGTCTATGATTTCTTATCAAGAGGGAGCCTTGAAGAAAACCTTCATGGTAATAAGAAAAATCCACTTGTGTTTGGTTGGACTGAGAGATATAAGGTGGCATTAGGTGTTGCCGAGGCTTTGGAGTATCTGCATAATAAAGGCGACCAACCTGTGATCCATCGCGATGTAAAATCATCGAATGTGTTATTATCTGAGGATTTTGAACCTCAGCTCTCTGACTTTGGACTTGCTAAATGGGCATCAACCTCATCATCACATATAACATGCACAGATGTTGCAGGAACCTTTGGTTACTTGGCTCCTGAATACTTTATGTATGGTAAAGTAAATGATAAGATTGATGTCTATGCATTTGGTGTGGTGCTTCTTGAGCTTCTTTCAGGGAGAAAGCCTATAAATGGTGATTATCCCAAAGGTCAAGAGAGCCTTGTCATGTGGGCAAGTCCAGTTCTAAATAGTGGGAAGATTTCACAATTGTTGGATCCTAGTTTGGATGATAACTATGACCATGAAGAGATGGAAAGGATGGTCTTAGCAGCCACACTTTGTATCCAACGTGCTCCGGGAGCTAGGCCTCAAATGAGCCTTATCACAAAGGTCCTTAAAGGTGATGCTGATGTAATAATGTGGGCAAAAGTTGAAATTAATGCTTTGAAAGTACCAGAAATGTTTGATGAAGAAGAAGCTTGTCCACTTTCTAAGTTACAGTCACACCTTAATCTTGCACTGCTTGATGTTGAGGATGACACACTCTCCTTGTGCAGTGTTGACCAAAATGTTTCTTTGGAAGACTACCTAAGAGGCAGGTGGAGCCGCTCATCTAGTTTTGATTGA 2187 0.4028 MFTACDGARTVVVAVKMESHTHSIQLLTWSLVNVARPGDLLLALHVLRNDEIVNRDGKSSLFSLVKAFDSVLSAYEGFCNLKQVDLKLKICRGSSVRRILVREANEYCASHVIVGKPQGLSKIRPSISIARYCAKKLSKDCCVLAVDNGKVVFKRDGSPTNRADIKGRIGFLGSIQWTLSKSSKVLNDDMHEKGTNEKISDQRLVNLFMDCKEVIGGKKSFSIFDSTAAILPESFCRQAADQESFCDGAGNSEKYSLALVPVKVSDADWKPGWPLLHSKISLPNRKSSERSSFHRISVVQWAMQLPSRDLYYAANDNKDQILGLDSKSGALVPVDTEIGIVASPEHESRSIPKELEGLHEKYSSTCRLFMYQELVSATSNFLPENLIGKGGSSQVYRGCLPDGKELAVKILNPSDDVLKEFVLEIEIITALHHKNIISLLGFCFEDDNLLLVYDFLSRGSLEENLHGNKKNPLVFGWTERYKVALGVAEALEYLHNKGDQPVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLSGRKPINGDYPKGQESLVMWASPVLNSGKISQLLDPSLDDNYDHEEMERMVLAATLCIQRAPGARPQMSLITKVLKGDADVIMWAKVEINALKVPEMFDEEEACPLSKLQSHLNLALLDVEDDTLSLCSVDQNVSLEDYLRGRWSRSSSFD 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02924 728 Gene3D Phosphorylase Kinase; domain 1 345 455 - -
Car04g02924 728 ProSitePatterns Serine/Threonine protein kinases active-site signature. 502 514 IPR008271 GO:0004672|GO:0006468
Car04g02924 728 ProSiteProfiles Protein kinase domain profile. 381 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02924 728 CDD STKc_IRAK 387 654 - -
Car04g02924 728 CDD USP_Like 10 146 - -
Car04g02924 728 PANTHER OS01G0253100 PROTEIN 9 722 IPR045271 GO:0004714|GO:0006468
Car04g02924 728 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 9 722 - -
Car04g02924 728 Pfam Protein kinase domain 385 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02924 728 SMART serkin_6 381 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02924 728 Gene3D Transferase(Phosphotransferase) domain 1 456 664 - -
Car04g02924 728 ProSitePatterns Protein kinases ATP-binding region signature. 387 409 IPR017441 GO:0005524
Car04g02924 728 SUPERFAMILY Protein kinase-like (PK-like) 362 652 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02924 Car-Chr4 56361380 56365485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02924 368 648 Trihelix Transcription Factor Family AT1G68690 45.804 4.64e-76 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Car04g02924 Pkinase 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02924 - - aprc:113846853 1072.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02924 04 56361380 56365485 Car04g02924 04 56361380 56365485 ECH