Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02922 ATGGATCAACACTTCCTCCACCACAACCACCACCACCACCAACAACACCGCACAAGATACGCTCCTCCAGCCCCTCAATCTCATCATCACCTCCCTCCCCCACCCCCGCTTCCTCCTCCACCCCCTCTCTCCTATCATACTATCCACACCCCTCCTCTTCCTCCTCCACCCCCACCCTACAACCCTCCTTTACCTCACCAATCTCCTCAATTCCCTTTTTACCCCATCGAAGAAGAACGTAACGACCACCTCCCCCGCCGTATCGTCCCCGAATCCCCATGGAACCCTAATCCCGACGATCGCTCAACAAGAAATTATCCTCCCATCGATTACGACCGCGATTCACACCATCACCACCACAACTACATCCACCGTCCTCCGCCTTCATATCCACCTATCCGATACGAACCTGATAACTCTTACGTTAGATTGAACACCGAAACCTCCCGCCTCGAAGGAAACCCTAGAGAAACCTTCGTCTATGGAAGAACCACCAACGACGACAGTTATCACCGCCACGTAACTTCCACCTCCACATCGAATCTCGTCTATCTAGAACGAGATGAAGTTTCCACTAGAATCGAAAACAGAAGGTGGTTGGATGACAGAAATCCTTCTCCTTGTCCTTCTTATGAATTAGTGAAGGATGAAATAAGTGCTTCTGTGAAACGTGATTATCACGGTTCTGAATCGGTTAGGTATAGTAATGGTAACAATGGTAGTAGATCGAATAGCAGAGAGTGTAATCACGTTCGTGAATTCAGTCGTACTCCACCGAAGAAACAGATTCAAAAGAAGAGTGCTCTTCTTAGAATTCAGACGGTCAAACCTAATCATAGGAACCGTGATGTTGAACAGTTACGTTATGTTCCTGATTCTAACAATAATTTCTTCAGGGGTAATAAAGATCAACATGGGGAACGTTATTCGAAGACTGAGGAGAGAAAACGAAGCCCAGTTGAGCTCGATATTTCTTTCGAATCGAACTCTCTTGTGGCAAAGGCGATTGTCGCGGCACcttctacttctggtgcggctcctgtttctgctAAATTATCTTCTGGTGGCGAAAATTTAAATGATAATGATGATAATTATACTAATTCCAAGAAGAATGTAGGTGATGCTTGTTCTGAGCCTGGTAACAGTGGAACAAGTAATCCTCATGAGAAAAATAAAGTGGTAATTTCTGTTGAAGCTAGTGGTACTTGTAAGGCTAAATTAGCCTCTAAGGTTGTTAAGAAGAAGAAAGTTGTTAAAAAAGTGGTGAAGAAAGTTTCAGTGAATACTAATTCAAGTGTGTCAGCTTCACCTTTGTTGGCCAATGCAGTTGGTGGAACTGTGCAAGAGGATTGTGTCACAGTCAGGTCATCCAATACTGCATCTGGAATTGTCGAAACTGTAACTTGTTTGGAAGAGAAAAGCAATGCTGTTGACAAGGTGTCTGTGCCAGATGATCAAGGGAATGTATTGACTGAAGATAAAAAGGGTGGTTTGTCCCTGCTGAGTTCAGGGTTAGGATGCAGGTTGCATGAATCTAAGAACGATGAAGATTCTGATACCGGGGAAGAATCCAGATCTGAAAGACGTGGAAGTATTTCAAATAGTCCGCCTTATGCTTCTAGTAGTGTAGATAAAAATAGTGGTTCTGATTGTTTAGATGTGTGTAATTCTATCCATGACTTGGTTAGAGTAACAAACATTGACAAGGGTACTAAATCATTAAATGGAAGTACTTTTGAAATCAATGACATGGATTGTGGAAACGAGCAATTTTGTCAGAGTGAAGTATTTCTATCACCTCGGAAATATACAAATGAAGGATGCTCAGAGAATAGGAATCATGTAGATGTAGGGAATGAAATGAATTACAATGTCATTTCTGCAGATATTGTAAATACACATAATTCTGTAGATGAGAGCGTTGATGGCTTCAATTCCAATGATCTTACTAGTTCAGAAGAGAAAGTTACTGAGGAAAATTCAGATACAGCCATTCCTCTGCCAAGCAGTGGAATGGTTGCCTTTTCAAGTTTAGAAGATACTAGGATTCAGGATGGTCAAGATTGCCTACAACATACCAGTGGACTGAAGCAGGGTTCTGATGATGGATCATCTTGTTTGGAAGATAGTATCATTGTTCACCATTTCGGTATCTTGAAAGATGCTGAAAAACTGGTGTCCCCTGGTGAAGTCCCCATATCCACTGAGAATTGTGACATAGATAAAACATTTCCAAATTCTAATATTTCACTTGGATTTGATATTAGGGTTACAAATAGGATAGAAAAGAGAGATGTTAGGACCCGTTTAGAATTTTTGAGTTTGAATTTGGATGATATATCTCTTAATTCAGTTAGCCATTCAAATGATGCTGATAGAGGCTCAAGTATTGTATTGAAGGATCCATATCCTTCAGAAGTCTTTTATCACTCTATTCAAAGCTTAGATTTTGACTCACAATCTAGCCAGGTTGGGGACATCGCATTACATGGAAAAAGGGCCTTTTCAGAGGTTGAATTTTGTGTTGCAAATGATGACAGGGATGATGCAAATAAGGTTTCACCAGTTTCTAAGAGGAAAAAAGTCAATGCTAGTCACCCAAATTTATCTCAATTTCAATCTGAATGTAGTGATTCAATTGTGGCTATCACATCTAATGCAGAAGTTCCTATCAGTTTCAGTGATAACCAAGAACATAAGAAAGACGACATTGCATTGTTAAGCATAGGTATGGGTATTCAGTCTAATGCTCAGTCGATGCCTCATTCAGGTGATATTGATAAGTTATCTGATTGTATTTTCAAGAAAGGATCATTCGAGTCTATGGATGCAAATAAGGAAACTAAGAGTTCTGAACATTTGGAATTGCAGCACTCAGATACAGTCTCTACACACTGCGAGGACTTAGCCATTCCAAATGTTCAGTTTTCAGAGTTGGGATATGAGCGGAGTGATAATGTTACTCCAGTTGTGTCTATAAGTAATAGTCAAACTGACATTTTGGTTATTGGAAATATCAAGGGAGAGAAGACAGATACACCGGCTGCTGAAAACAATTCCCATCATAGAGATGAAGACGATGTGCAAAGGTCTCCAAGGGATGATATGCTATCAAATGATCTCAATATGAAGGACAATTCACTTGCTCAGGAGAACCTTTTGTTCTGTCCTGCTGATGGTGATGGAGTCACTATCAGTAATTCAAATAATGAATTGATTGAGGATTTGCCTGATGCTGTATCAGATATGTTTTCTCAAGAGATGGCATCTGATTTACCGGATAAAATGATTACAGAATTTACATCAATTTATGATGAAAACATTTGTGGGGATGAAGAAAATCTGAGTAGTGTATCTATGGTCAAACATGGTTCTGACTCGAATACTTCATCAATACAGCATACTGAAAAAACTATTGCAGATCATGCAATTGGGTGTAATGACCCAATAACAAGGAATATAATGTCAGCACCAACCCAAATTTATTCCAAGGTTACACCTCAGGGTTTAAATTCAAATGGAAGCAAAAATCAGTCAGGTAACAGTCTTGTTAGGAATCCTACTCCAGTTTCTGCTATACCTCAAATCTCCTCTACCAGTCTTGGGAGCAGACCTACTCCAGTTTCTTCTATACCTAAAATCTCCTCTACCAATCCACTACCTTTGAGCTTCGGAGAAATGCTTAAGGGCACCAAACCCGAAAACAGGGTTGATTTGACTGATCAGCCAATCAACTGTAAAACAGAACTATCGAATACTCCTCTGCAGAGGCATAGATTACCTTCTCTACCCATGGACACCAAATTAGGGGAAAATATATCTTCCCCGTTGTCAGAGCCTCTTTCTAGTGGCTGCTGTGAAAATGCATCTGATCTTAGGAAATTTACAGAGAATAATGATGCACCAGCCTCTTGTGAAGATGTGCTAAAACAATATGAAACTCCTGAAAATCAAACTGGTCCATCTAGCAATGGGGAGAGCCAAGCTGAAGGAAACGATGGAAATGTTTCTTCTTTGAACTCAAAAAAAATAGTTTATATAAAGCCCAAAACAAATCAATTGGTTGCAACTTCGAGTTCTTGTGATATTATTGCCTCTATTGATGACAAAGGCCAAACAGCTTGCTCCGATAGCTACTACAAGAGGAGGAAAAATCAATTGGTTAGGACTACATTTGAAAACCATGTCAACCAGACAGTTGCAATGCCCAATAACATTGTAAATCATGATGGTCAAGGGGCTAGAAAAGTACTTTGCAACAGGAAGTTTACCAAGAGGCGGTCAAACAAGGTTGCTGGGGTTTCGTGCAAATCTTCTAGAGCCTCATTAGTGTGGACACTTCGTAGCAAAAATTCATCTGGAAATGACAGGGACGCCTGGCATCATCAAAAAGTTTTACCTCACTTGTTTCCATGGAAAAGAACAACATATTCAAGAAGCTTCATTCATAATTCTGCTTCAAGTTTCAATAGTGGTTCCTTATCTGCAGTCGGCAAGAAATTACTTATGTTGAGAAAGAGGGATACTGTATACACCAGGTCGACCCGTGGATTTTCTCTTTGGAAATCCAAGGTTTTAGGCGTTGGTGGGTCTAGTTTAAAATGGTCAAAATCCATTGAGAAGCACTCAAAGAAAGCTAATGAGGAAGCCACCCTTGCTGTTGCTGCAGTTGAGAAGAAGAAGAGAGAGCAGAAAGATCCAGCTTGTGTTAGTCGTCAGACAAAGAGAGAACGTATATTCCGTGTTGGTTCAGTTCGCTACAAAATGGATCCTTCCAGGCGGACACTTCAGAGGATTTCAGACGATGAATCCCTGGCCTCTGCCTCTCTCAGTTCAGGTTCGGCTTCCAAAAGAGGTTACATTCCAAGGAGATTAGTGATTGGAAATGACGAATATGTCCGAATTGGCAACGGAAACCAACTTGTCAGAGACCCAAAGAAAAGAATTCGAAAATTGGCAAATGAAAAAGTTAGATGGAGCTTGCATACAGCCAGACAACGGTTGGCTCGTAAGCAGAAGTATTGTCAGTTTTTCACAAGATTTGGGAAATGTAACAAGGATGGAGGGAAGTGTCCTTACATTCACGATCCTTCAAAAATTGCTGTCTGTACTAAGTTCCTGAATGGTTTATGTTCTACTCCAAACTGCAAATTGACTCATAAGGTTATTCCAGAGAGAATGCCTGATTGTTCATACTTTTTGCAAGGCTTATGTTCAAACAAAAATTGTCCATATAGACATGTCAATGTGAACCCGAACGCATCTATCTGTGAAGGATTTCTTAAAGGTTTTTGTGCTGATGGGAATGAGTGTCGGAAGAAGCACAGCTACATTTGTCCTAGTTTTGAAGCAACAGGAACATGTACTCAAGGAACTAAATGCAAGCTTCACCACCCGaagaaacagagaaagggaaagaaaagaaagagaTCCGAAACTCAGAACAATGGTAGAGGGCGTTACTTTGGTTCTGGGATGTTGGTGGCAACCAGTCCAAGCCATCCTCAACAGAATGAAGATCCTGAAAAAGAACTAGCTGACTACATCAGTCTTGATGTGTATGAAGATGCTGCAGACACGGCTGACCAATCATTTGAGCTATCAACATTTTGTGACAATGATACTTTGGATCTTCAGTTGGAGGATACTTCTGATGAACTCATTAAACCTGTTTATATTATAGCAAAGTTAGCTTCGCAATCTCAGTCCAGAAGCCTGCAAGCTTAG 5730 0.4017 MDQHFLHHNHHHHQQHRTRYAPPAPQSHHHLPPPPPLPPPPPLSYHTIHTPPLPPPPPPYNPPLPHQSPQFPFYPIEEERNDHLPRRIVPESPWNPNPDDRSTRNYPPIDYDRDSHHHHHNYIHRPPPSYPPIRYEPDNSYVRLNTETSRLEGNPRETFVYGRTTNDDSYHRHVTSTSTSNLVYLERDEVSTRIENRRWLDDRNPSPCPSYELVKDEISASVKRDYHGSESVRYSNGNNGSRSNSRECNHVREFSRTPPKKQIQKKSALLRIQTVKPNHRNRDVEQLRYVPDSNNNFFRGNKDQHGERYSKTEERKRSPVELDISFESNSLVAKAIVAAPSTSGAAPVSAKLSSGGENLNDNDDNYTNSKKNVGDACSEPGNSGTSNPHEKNKVVISVEASGTCKAKLASKVVKKKKVVKKVVKKVSVNTNSSVSASPLLANAVGGTVQEDCVTVRSSNTASGIVETVTCLEEKSNAVDKVSVPDDQGNVLTEDKKGGLSLLSSGLGCRLHESKNDEDSDTGEESRSERRGSISNSPPYASSSVDKNSGSDCLDVCNSIHDLVRVTNIDKGTKSLNGSTFEINDMDCGNEQFCQSEVFLSPRKYTNEGCSENRNHVDVGNEMNYNVISADIVNTHNSVDESVDGFNSNDLTSSEEKVTEENSDTAIPLPSSGMVAFSSLEDTRIQDGQDCLQHTSGLKQGSDDGSSCLEDSIIVHHFGILKDAEKLVSPGEVPISTENCDIDKTFPNSNISLGFDIRVTNRIEKRDVRTRLEFLSLNLDDISLNSVSHSNDADRGSSIVLKDPYPSEVFYHSIQSLDFDSQSSQVGDIALHGKRAFSEVEFCVANDDRDDANKVSPVSKRKKVNASHPNLSQFQSECSDSIVAITSNAEVPISFSDNQEHKKDDIALLSIGMGIQSNAQSMPHSGDIDKLSDCIFKKGSFESMDANKETKSSEHLELQHSDTVSTHCEDLAIPNVQFSELGYERSDNVTPVVSISNSQTDILVIGNIKGEKTDTPAAENNSHHRDEDDVQRSPRDDMLSNDLNMKDNSLAQENLLFCPADGDGVTISNSNNELIEDLPDAVSDMFSQEMASDLPDKMITEFTSIYDENICGDEENLSSVSMVKHGSDSNTSSIQHTEKTIADHAIGCNDPITRNIMSAPTQIYSKVTPQGLNSNGSKNQSGNSLVRNPTPVSAIPQISSTSLGSRPTPVSSIPKISSTNPLPLSFGEMLKGTKPENRVDLTDQPINCKTELSNTPLQRHRLPSLPMDTKLGENISSPLSEPLSSGCCENASDLRKFTENNDAPASCEDVLKQYETPENQTGPSSNGESQAEGNDGNVSSLNSKKIVYIKPKTNQLVATSSSCDIIASIDDKGQTACSDSYYKRRKNQLVRTTFENHVNQTVAMPNNIVNHDGQGARKVLCNRKFTKRRSNKVAGVSCKSSRASLVWTLRSKNSSGNDRDAWHHQKVLPHLFPWKRTTYSRSFIHNSASSFNSGSLSAVGKKLLMLRKRDTVYTRSTRGFSLWKSKVLGVGGSSLKWSKSIEKHSKKANEEATLAVAAVEKKKREQKDPACVSRQTKRERIFRVGSVRYKMDPSRRTLQRISDDESLASASLSSGSASKRGYIPRRLVIGNDEYVRIGNGNQLVRDPKKRIRKLANEKVRWSLHTARQRLARKQKYCQFFTRFGKCNKDGGKCPYIHDPSKIAVCTKFLNGLCSTPNCKLTHKVIPERMPDCSYFLQGLCSNKNCPYRHVNVNPNASICEGFLKGFCADGNECRKKHSYICPSFEATGTCTQGTKCKLHHPKKQRKGKKRKRSETQNNGRGRYFGSGMLVATSPSHPQQNEDPEKELADYISLDVYEDAADTADQSFELSTFCDNDTLDLQLEDTSDELIKPVYIIAKLASQSQSRSLQA 1909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02922 1909 MobiDBLite consensus disorder prediction 292 317 - -
Car04g02922 1909 MobiDBLite consensus disorder prediction 26 70 - -
Car04g02922 1909 MobiDBLite consensus disorder prediction 1315 1338 - -
Car04g02922 1909 SMART c3hfinal6 1779 1801 IPR000571 GO:0046872
Car04g02922 1909 SMART c3hfinal6 1725 1750 IPR000571 GO:0046872
Car04g02922 1909 SMART c3hfinal6 1699 1723 IPR000571 GO:0046872
Car04g02922 1909 SMART c3hfinal6 1752 1778 IPR000571 GO:0046872
Car04g02922 1909 SMART c3hfinal6 1670 1698 IPR000571 GO:0046872
Car04g02922 1909 ProSiteProfiles Zinc finger C3H1-type profile. 1725 1751 IPR000571 GO:0046872
Car04g02922 1909 MobiDBLite consensus disorder prediction 231 245 - -
Car04g02922 1909 Gene3D - 1697 1751 - -
Car04g02922 1909 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 3 313 1896 - -
Car04g02922 1909 PANTHER CCCH ZINGC FINGER 313 1896 - -
Car04g02922 1909 MobiDBLite consensus disorder prediction 1242 1259 - -
Car04g02922 1909 MobiDBLite consensus disorder prediction 1800 1814 - -
Car04g02922 1909 MobiDBLite consensus disorder prediction 510 547 - -
Car04g02922 1909 MobiDBLite consensus disorder prediction 1800 1824 - -
Car04g02922 1909 MobiDBLite consensus disorder prediction 346 391 - -
Car04g02922 1909 MobiDBLite consensus disorder prediction 638 652 - -
Car04g02922 1909 MobiDBLite consensus disorder prediction 1166 1284 - -
Car04g02922 1909 MobiDBLite consensus disorder prediction 87 106 - -
Car04g02922 1909 ProSiteProfiles Zinc finger C3H1-type profile. 1670 1699 IPR000571 GO:0046872
Car04g02922 1909 MobiDBLite consensus disorder prediction 1015 1038 - -
Car04g02922 1909 MobiDBLite consensus disorder prediction 1009 1038 - -
Car04g02922 1909 Gene3D - 1752 1816 - -
Car04g02922 1909 MobiDBLite consensus disorder prediction 301 317 - -
Car04g02922 1909 MobiDBLite consensus disorder prediction 246 260 - -
Car04g02922 1909 MobiDBLite consensus disorder prediction 638 670 - -
Car04g02922 1909 MobiDBLite consensus disorder prediction 229 266 - -
Car04g02922 1909 MobiDBLite consensus disorder prediction 1 73 - -
Car04g02922 1909 ProSiteProfiles Zinc finger C3H1-type profile. 1774 1802 IPR000571 GO:0046872
Car04g02922 1909 MobiDBLite consensus disorder prediction 510 530 - -
Car04g02922 1909 MobiDBLite consensus disorder prediction 342 391 - -
Car04g02922 1909 MobiDBLite consensus disorder prediction 531 547 - -
Car04g02922 1909 MobiDBLite consensus disorder prediction 1166 1223 - -
Car04g02922 1909 MobiDBLite consensus disorder prediction 1269 1284 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02922 1676 1833 C2H2 Transcription Factor Family AT2G32930 28.485 8.49e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Car04g02922 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02922 - - lja:Lj1g3v0268620.1 1757.27