Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02917 ATGCAAATGTCAAAGTCTCCCTCTCCTGAACAACAGAGATCCGTTTATACTGTTTCTCAGCCCATGGAATTCGACGACGAAGAAGGAATGAATGATCCAGAATCTACAATGGCAACAGTTGCTAATTTTTTGGAGCAACTGCATGCCAACACCTCATCACCACTCGAGAAAGAACTTATTACAGCACAATTATTAGGTGTTGCCAGGAGAAGAAAGGATGCTAGAGCATTTATTGGTTCTCATGCCCAAGCCATGCCATTGTTCATAAACATTCTCAGAAAAGGAACTCCTCTTGCAAAAGTTAATGTAGCTTCCACTCTGAGTATCCTGTGCAAAGACTTGAGGTTAAAAGTACTTCTTGGTGGTTGTATCCCACCATTACTGTCAGTTTTAAAATATGAATCCACTGATGCCAGGAAGGCAGCAGCAGAAGCAATATATGAAGTTTCCTCTGGTGGTCTTTCAGATGATCATGTTGGTATGAAAATTTTTGTTACAGAAGGTGTAGTTCCAACCTTATGGAATCAACTACATCCACAGAACAAGGAAGACAAAGTTGTCGAGGGTTTTATTACTGGAGCATTAAGAAATCTATGTGGGGACAAAGATGGCTATTGGAAAGCAACATTAGAAGCTGGAGGTGTGGATATCATTGTGGGTCTCTTGTCTTCAGATAATTCTGTCTCTCAGTCAAATGCAGCTTCTTTGTTGGCACGTTTAATGCTGGCTTTCAGTGATAGCATCCCCAAAGTAATAGACTCTGGAGCAGTCAAAGCTTTGCTTCGACTTGTTGGTCAGGAAAATGATATTTCTGTACGAGCCAGTGCTGCCGATGCCCTAGAGGCCCTTTCTTCAAAGTCTACCAAGGCTAAAAAAGCTATTATTAATGCGGATGGTGTTCCTATCCTTATCGGAGCTATTGTTGCTCCTTCTAAAGAGTGTATGCGAGGTGATGGTGGTCAGGCCTTACAGGAGCATGCAACTCGAGCTTTAGCCAACATCTATGGGGGCATGTCTTCTTTAATACTATATCTTGGAGAACTTTCCCATTCTCCCTGTCTTGCTGCACCAGTTGGTGATATAATTGGTGCTCTTGCTTATACACTAATGGTCTTTGTAGAAAACCTTGATGTTGATGAGGAACATTTTGATGCAACTAAAATAGAGGATAATCTAGTAACTCTTTTGAAGCCTAGAGACAACAAGCTGATTCAAGAGCGTGTCCTTGAGGCCATGGCTAGCCTTTATGGAAACATCTATCTCTCGAAGTGGCTCGTTCAAGCAGATTCAAAGAAGGTTCTCATTGGACTTATAACTATGGCTGCTCCTGATGTGCAAGAGTGTCTGATACTTTCATTGACAAGCTTGTGTTGTGACAGGATTGGAATATGGGAAGCCATAAAAAAACGAGAAGGTATCCAATTGCTGATATCATTGGTGGGATTATCCAGTGAGCAGCATCAAGAGTACTCAGTTCAATTGCTAGCGATCTTAACCGACCAGGTTGATGACAGCAAATGGGCAATCACTGCTGCTGGGGGGATTCCACCATTGGTGCAGTTGTTGGAGACAGGATCACAAAAAGCTAGAGAGGAAGCAGCTAATGTTCTTTGGAGTTTGTGCTGTCACAGTGAAGATATTCGTGCCTGTGTTGAAAGTGCTGGGGCAGTACCTGCATTTTTGTGGCTTCTCAAGAGTGGTGGACCAAAAGGACAAGAAGCTTCTGCTATGGCACTCACAAAGCTTGTCCGAGTAGCTGACTCTGCCACAATTAATCAGCTATTAGCATTGCTCCTAGGGGATTCTACAAGTTCGAAGGCCCATATTATTCGGGTTTTAGGTCATGTGCTTTCTGTTGCCTCACAAAAGGACCTCCTTCAGAAGGGTTCTGCAGCCAATAAAGGACTGAGATCTCTTGTTCAAGTTCTCAATTTATCAAATGATGAAACCCAAGAATATGCAGCTTCAGTCCTTGCTGATTTGTTTATCACAAGACAAGACATTTGTGATAGTCTTGCAACTGACGAGATCGTGCATTCTTGCATGAAGCTTTTGACTAGCAAAACTCAAGGTGTTGCTACTCAGTCCGCTCGAGCCTTGTGTGCTTTGTCTCGTCCAACCAAGAGCAAAGCTGCAAATAAGATGTCTTATCTTGTAGAGGGTGATGTTGAGCCACTAATCAAATTAGCTAAAACATCCTCTGTTAATGCTGCTGAAACTGCTGTTGCTGCATTGGCCAATCTTCTCATTGATCCTTTTATTGCTGCTGAAGCTCTAGCTGAAGATGTTGTTTCAGCTTTAACAAGAGTTCTGGCAGAAGGAACCGTGGAAGGTAAACAAAATGCATCACGCGCACTTCATCAATTACTGATGCATTTTCCAGTAGGTGACGTTCTCAAGGGGAATGCTCAATACCGTTTCACTGTGCTTGCACTTGTTGATTCTTTAAGAGCTATGGATATGGATGGAATTGATGCTGCAGATACTTTAGGAGCAATTGCACTGCTATTCAGGACTAAACCGGGTGTTAACTTCACTTACCCTCCCTGGTTAGCTCTGGCCGAGATGCCATCAAGCTTAGAACCTCTCATTTACTGTTTGGCTGAGGGGCCTTCCCTTGTGCAAGATAAGGCAATTGAAATACTATCTAGGCTTTGTGGGGATCAGCCAGCTGTTCTTGGTGATTTGTTATTTGCCAGTTCCAGATCCATTGTTTCATTGGCTAATAGAATAATAAACTCCTCCAGTTCAGAAGTTAAAGTTGGGGGAGCTGCCTTACTAATTTGTGCTGCAAAGGAGAAGAAAGAGCTTTCAATAGATTCAATTGACTCTTCTGGCTGTCTAAAACCACTAATATATTCTTTAGTTGATATGATGAAGCAGAGTTGTAGCTATTCTTCATTAGATATTGAAGTATTCACCACTAAAGGTTTTATGGAGAGGAATGCATTTCAAGAAGTTGACGAGTTTGATATTCCTGATCAAGGTGCAGTCTTGGGAGGTACTGTTGCCCTGTGGTTGCTCTCAATTATTGCTTCTTTTCATACGAAGAGCAAGCTCACAATTTTGGAAGCTGGTGGACTTGAAGTTCTCTATAACAAACTTGTGAGACATACTTCAAATCCTCAGGAAGAATATGAGGATACAGAAGGAATATGGATCAGTGTCTTGTTCTTGGCCATTTTATTTCAAGATCCAAACATCATTCTGTCGCCTGCAACAATGGACATTATACCTTCTATCGCTCTTCTGCTAAGATCCGAAGAAGTAATTGATAAATATTTTGCTGCCCAGGCTATGGCTAGTCTTGTTTGTAATGGTAATAGGGGGATAAATCTAGCCATTGCAAATTCTGGTGCCATTGCTGGATTGATAACTATTATTGGATATATTGAATCAGATATGCCAAATCTCATGGCTTTATCAGAAGAATTCTCTTTGGTGCGGAACCCTGATCAAGTTGTGTTGGATCACCTTTTTGAAATTGAAGATGTAAGATTGGGATCTACTGCACATAAATCTATACCCCTCTTAGTGGACCTCTTAAGACCAATACCAGAAAGGCCTAATGCTCCACCAATTGCTGTTAGACTCTTGATATCCATTGCACATGGAAGTGATACAAATAAATTAATTCTGGCAGAGGCTGGCGCTCTGGAAGCTTTGAACAAATACCTATCCTTGAGCCCTCAAGATTCAACTGAGATTGCTATTTCAGAGTTATTGAGAATATTATTCTGTAATTCCGACCTCATTAAACATGAAGCATCAACAGATTCATTGAATCAGCTCATAGCTGTTTTGCGTCTTGGATCAAGAAATGCTAGATATAGTGCAGCAAGAGCACTTCATGAACTTTTTGAAGCTGAATATATCAGAGAATCAGAATTAGCTAAACAGGCCATTCAGCCACTGGTTGACATGCTTAACACAACATCAGGGAGTGAGCAGGAAGCTGCTCTCATGGCCTTGATCAAGTTAACATCAGGAGATTCGTCAAAAGCATGCATTTTTACTGATCTGGAAGGGAATCCACTTGAAAGTTTATACAAAGTATTGTCTTCTGCTTCATCTTTGGAACTGAAGAGCCATGCTGCACATCTCTGCTTTGCTCTTTTTGGTAATAGCAAGATCAGAGCAAACCCTGTTGCCTCAGAATGCCTAAAACCCCTTATATCACTGATGCAGTCTGGTTCTGGGACAGCAATAGAATATGGGGTTTGTGCTTTTGATAGATTGTTGGAAGATGAACCGCTGGTAGAGCTTGCAGCAGCCTATAATGTTGTGGATCTCCTTGTCGGCTTGGTTTCTGGTACAAACTATCAGCTTATTGAAGCTACTATATCTGCTCTAATCAAATTGGGTAAAGACAGAACTCCTTGCAAACTTGACATGGTCAAAGCTGGCATTATTGATAATTGTCTCAAGTTACTCCAATCAGTACCTAGCTCATTATGCTCCACAATAGCTGAGCTTTTTCGCATTTTAACTAATAGTAATGCAATTGCTAGAAGTTCAGGTGCTGCTGAAATTGTAGAACCCCTTTTCCATGTTTTACTCCGTCGAGATTTCAACTTATGGGGACAGCATAGTTCCTTACAAGCCCTTGTAAATATATTGGAGAAACCACAAAGTCTTGCAACCTTAAAGCTTACTCCTAGCCAAGTCATTGAACCCTTGATTTCTTTTCTGGAATCCCCGTCCCAAGCTATTCAGCAGCTTGGCACAGAACTGTTGTCTCATCTTCTTGCACAGGAACACTTTCAGCAAGATATTACAACAAAGAATGCAGTTGTGCCCCTTGTACAGCTTGCAGGAATTGGAATTTTAAGCTTACAGCAAACGGCAATAAAAGCATTGGAAAAAATTTCCAAGAGCTGGCCAAAGGCCGTTGCGGATGCTGGAGGTATTTTTGAGCTTGCAAAAGTTATTATTCAAGATGACCCTCAACCACCACATGCACTCTGGGAATCAACTGCTTTAGTTCTGTCTAATGTATTACGTTCCAATGCTGATTACTATTTTAAAGTTCCTGTTTTGGTTCTTGTCAAACTCTTGCACTCAACACTTGAGAGTACAATTAGCATAGCACTAAATGCTTTAATAGTTCATGAAAGAAGCGATGCTTCAAGTGCTGAACAGATGATGGAAGCTGGAGCTATAGATGCTCTATTGGACCTTATAAGATCTCATCAATGTGAAGAAGCATCTGGTAGTTTACTTGAAACTTTATTTAACAACGCGAGAGTGCGGGAGACGAAGGTATCTAAGTATGCTATAGCACCTTTATCCCAATATTTATTAGATCCACAAACCAGATCACAGTCCGGCAAGCTTCTTGCTGCTTTAGCTCTGGGAAATCTTTCCCAGCATGAACGACTTGCTAGAGCTAGTGACTCTGTTTCTGCATGTCGTGCATTGATAAGTTTACTTGAGGATCAGCCAACTGAAGAAATGACGATGGTGGCTATATGTGCGTTACAAAACTTTGTCATGAACAGCAGGACCAATAGGCGTGCTGTTGCAGAAGCTGGGGGCATACTGGTGATTCAGGAATTGCTACTGTTTCCAAATACAGAAGTTTCTGGACAAGCAGCTCTATTGATCAGATTTTTGTTTTCTACCCACACATTACAAGAATACGTGTCAAATGAGCTGATCAGATCTTTGACAGCTGCACTGGAAAGAGAGTTGTGGTCGACTGCCACAATCAATGAGGAGGTTTTGAAAACATTGCATGTGATATTCATGAATTTTCCTAAGCTTCACATATCTGAAGCAGCAACCCTTTGCATTCCTCATTTGGTAGGGGCACTTAAATCTGGCAGTGAAGTGGCTCAAGACTCTGTACTTGACACCTTTTTCTTGCTAAAACAATCATGGTCGACCATGCCAATAGATATAGCAAAATCTCAAGCCATGATTGCCGCTGAAGCCATCCCCATCTTGCAGATGCTCATGAAAACCTGCCCACCAAGTTTCCATGAGAGGGCAGATACTCTTCTGCACTGCTTACCAGGTTGTTTGACTGTCACCATTAAACGTGGAAACAACCTCAAGCAAACAATGGGAAGCACTAATGCATTCTGCCAGTTGACAATAGGCAATAGCCCTCCAAAACAAACCAAGGTAGTGAACCATAGTACTTCTCCGGAATGGAAAGAAGGATTCACATGGGCATTTGATATACCTCCCAAGGGCCAAAAGCTCCATATCGTATGCAAAAGCAAGAATACTTTTGGGAAGTCAAGTCTTGGAAGAGTCACCATCCAGATTGATAAAGTTGTAACAGAAGGGGTTTATAGTGGATTATTCAGTCTTAATCATGACGGCAACAAAGATGGTTCTTCCCGAACACTTGAAATTGAGATTATATGGTCTAACAGAATTTCTAATGATGACATTTGA 6408 0.415 MQMSKSPSPEQQRSVYTVSQPMEFDDEEGMNDPESTMATVANFLEQLHANTSSPLEKELITAQLLGVARRRKDARAFIGSHAQAMPLFINILRKGTPLAKVNVASTLSILCKDLRLKVLLGGCIPPLLSVLKYESTDARKAAAEAIYEVSSGGLSDDHVGMKIFVTEGVVPTLWNQLHPQNKEDKVVEGFITGALRNLCGDKDGYWKATLEAGGVDIIVGLLSSDNSVSQSNAASLLARLMLAFSDSIPKVIDSGAVKALLRLVGQENDISVRASAADALEALSSKSTKAKKAIINADGVPILIGAIVAPSKECMRGDGGQALQEHATRALANIYGGMSSLILYLGELSHSPCLAAPVGDIIGALAYTLMVFVENLDVDEEHFDATKIEDNLVTLLKPRDNKLIQERVLEAMASLYGNIYLSKWLVQADSKKVLIGLITMAAPDVQECLILSLTSLCCDRIGIWEAIKKREGIQLLISLVGLSSEQHQEYSVQLLAILTDQVDDSKWAITAAGGIPPLVQLLETGSQKAREEAANVLWSLCCHSEDIRACVESAGAVPAFLWLLKSGGPKGQEASAMALTKLVRVADSATINQLLALLLGDSTSSKAHIIRVLGHVLSVASQKDLLQKGSAANKGLRSLVQVLNLSNDETQEYAASVLADLFITRQDICDSLATDEIVHSCMKLLTSKTQGVATQSARALCALSRPTKSKAANKMSYLVEGDVEPLIKLAKTSSVNAAETAVAALANLLIDPFIAAEALAEDVVSALTRVLAEGTVEGKQNASRALHQLLMHFPVGDVLKGNAQYRFTVLALVDSLRAMDMDGIDAADTLGAIALLFRTKPGVNFTYPPWLALAEMPSSLEPLIYCLAEGPSLVQDKAIEILSRLCGDQPAVLGDLLFASSRSIVSLANRIINSSSSEVKVGGAALLICAAKEKKELSIDSIDSSGCLKPLIYSLVDMMKQSCSYSSLDIEVFTTKGFMERNAFQEVDEFDIPDQGAVLGGTVALWLLSIIASFHTKSKLTILEAGGLEVLYNKLVRHTSNPQEEYEDTEGIWISVLFLAILFQDPNIILSPATMDIIPSIALLLRSEEVIDKYFAAQAMASLVCNGNRGINLAIANSGAIAGLITIIGYIESDMPNLMALSEEFSLVRNPDQVVLDHLFEIEDVRLGSTAHKSIPLLVDLLRPIPERPNAPPIAVRLLISIAHGSDTNKLILAEAGALEALNKYLSLSPQDSTEIAISELLRILFCNSDLIKHEASTDSLNQLIAVLRLGSRNARYSAARALHELFEAEYIRESELAKQAIQPLVDMLNTTSGSEQEAALMALIKLTSGDSSKACIFTDLEGNPLESLYKVLSSASSLELKSHAAHLCFALFGNSKIRANPVASECLKPLISLMQSGSGTAIEYGVCAFDRLLEDEPLVELAAAYNVVDLLVGLVSGTNYQLIEATISALIKLGKDRTPCKLDMVKAGIIDNCLKLLQSVPSSLCSTIAELFRILTNSNAIARSSGAAEIVEPLFHVLLRRDFNLWGQHSSLQALVNILEKPQSLATLKLTPSQVIEPLISFLESPSQAIQQLGTELLSHLLAQEHFQQDITTKNAVVPLVQLAGIGILSLQQTAIKALEKISKSWPKAVADAGGIFELAKVIIQDDPQPPHALWESTALVLSNVLRSNADYYFKVPVLVLVKLLHSTLESTISIALNALIVHERSDASSAEQMMEAGAIDALLDLIRSHQCEEASGSLLETLFNNARVRETKVSKYAIAPLSQYLLDPQTRSQSGKLLAALALGNLSQHERLARASDSVSACRALISLLEDQPTEEMTMVAICALQNFVMNSRTNRRAVAEAGGILVIQELLLFPNTEVSGQAALLIRFLFSTHTLQEYVSNELIRSLTAALERELWSTATINEEVLKTLHVIFMNFPKLHISEAATLCIPHLVGALKSGSEVAQDSVLDTFFLLKQSWSTMPIDIAKSQAMIAAEAIPILQMLMKTCPPSFHERADTLLHCLPGCLTVTIKRGNNLKQTMGSTNAFCQLTIGNSPPKQTKVVNHSTSPEWKEGFTWAFDIPPKGQKLHIVCKSKNTFGKSSLGRVTIQIDKVVTEGVYSGLFSLNHDGNKDGSSRTLEIEIIWSNRISNDDI 2135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02917 2135 SUPERFAMILY ARM repeat 1175 1546 IPR016024 -
Car04g02917 2135 Gene3D - 40 156 IPR011989 -
Car04g02917 2135 Gene3D - 1796 2005 IPR011989 -
Car04g02917 2135 Gene3D C2 domain 2007 2133 IPR035892 -
Car04g02917 2135 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 255 299 IPR000225 GO:0005515
Car04g02917 2135 ProSiteProfiles C2 domain profile. 1988 2105 IPR000008 -
Car04g02917 2135 CDD C2 2009 2099 - -
Car04g02917 2135 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 21 2133 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Car04g02917 2135 Gene3D - 1154 1342 IPR011989 -
Car04g02917 2135 Gene3D - 363 631 IPR011989 -
Car04g02917 2135 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 513 555 IPR000225 GO:0005515
Car04g02917 2135 Pfam C2 domain 2008 2107 IPR000008 -
Car04g02917 2135 Gene3D - 632 803 IPR011989 -
Car04g02917 2135 PANTHER - 21 2133 - -
Car04g02917 2135 Gene3D - 1585 1795 IPR011989 -
Car04g02917 2135 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1173 1217 IPR000225 GO:0005515
Car04g02917 2135 Gene3D - 825 1142 IPR011989 -
Car04g02917 2135 SMART arm_5 111 151 IPR000225 GO:0005515
Car04g02917 2135 SMART arm_5 1206 1246 IPR000225 GO:0005515
Car04g02917 2135 SMART arm_5 623 663 IPR000225 GO:0005515
Car04g02917 2135 SMART arm_5 287 336 IPR000225 GO:0005515
Car04g02917 2135 SMART arm_5 1289 1329 IPR000225 GO:0005515
Car04g02917 2135 SMART arm_5 156 200 IPR000225 GO:0005515
Car04g02917 2135 SMART arm_5 1458 1498 IPR000225 GO:0005515
Car04g02917 2135 SMART arm_5 458 500 IPR000225 GO:0005515
Car04g02917 2135 SMART arm_5 544 584 IPR000225 GO:0005515
Car04g02917 2135 SMART arm_5 502 542 IPR000225 GO:0005515
Car04g02917 2135 SMART arm_5 1416 1456 IPR000225 GO:0005515
Car04g02917 2135 SMART arm_5 1834 1874 IPR000225 GO:0005515
Car04g02917 2135 SMART arm_5 710 750 IPR000225 GO:0005515
Car04g02917 2135 SMART arm_5 1708 1749 IPR000225 GO:0005515
Car04g02917 2135 SMART arm_5 751 791 IPR000225 GO:0005515
Car04g02917 2135 SMART arm_5 244 285 IPR000225 GO:0005515
Car04g02917 2135 SMART arm_5 1543 1584 IPR000225 GO:0005515
Car04g02917 2135 SMART arm_5 201 242 IPR000225 GO:0005515
Car04g02917 2135 SUPERFAMILY ARM repeat 858 1113 IPR016024 -
Car04g02917 2135 Gene3D - 1343 1584 IPR011989 -
Car04g02917 2135 Gene3D - 157 356 IPR011989 -
Car04g02917 2135 SUPERFAMILY ARM repeat 270 457 IPR016024 -
Car04g02917 2135 SUPERFAMILY ARM repeat 443 795 IPR016024 -
Car04g02917 2135 MobiDBLite consensus disorder prediction 1 19 - -
Car04g02917 2135 Pfam Armadillo/beta-catenin-like repeat 506 541 IPR000225 GO:0005515
Car04g02917 2135 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2006 2112 IPR035892 -
Car04g02917 2135 SUPERFAMILY ARM repeat 1557 1990 IPR016024 -
Car04g02917 2135 SMART C2_3c 2008 2104 IPR000008 -
Car04g02917 2135 MobiDBLite consensus disorder prediction 1 34 - -
Car04g02917 2135 SUPERFAMILY ARM repeat 73 309 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02917 Car-Chr4 56286085 56296793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02917 459 661 U-box Gene Family AT3G46510 29.524 6.20e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02917 - - aprc:113846793 3583.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02917 04 56286085 56296793 Car04g02917 04 56286085 56296793 ECH