Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02904 ATGAATGATCCCTGCCATCTCAGCACACCGTCGAAGCGGCGAGCAGAACACGAGCTGCATGCATCATGTACAGACCAAAACAACAACAAGAAGAGAAAATCACCAACAAAAGTCACTTCTCGAAAAAGAACCTCCAGGAATAATATGCCTAAGAAAAATGCATCAGTTAAAGGGATTAAGGAGACTACTTCGCCTGATCTGGCTCGGAAGATTGATTTGCGGTTGGAGGCAAAATTATCAGCTGAGGAAAATTCAAGGATGTTTGCGGGAAGGCAAATACATCCGTTTTTTTCAACGTGGAAGGTGGAGAAGAAATTTCGGGAGTCAGCTGATTCAGAATGCAGTTCGTCTACTGCTAAGGGGGAGAATGGAAGAACTATCTGCGGTCCTATTCATGTATTTGAAGATTTTCAGGATGATACTTCATTTCTTGATTGGAATGATTGGAAATTTTTGGAGAATACCACCGTTGTGGATTTTGGTCCTGAAAGTTCAAATTTATCCGTTATGGAGGGTTCTATTGAATCCTTAAATTTTGACAACTTTCTTAGTGCTGTAAAACCTTCAAGGACTTCAATTTCTCAGAATGCCTTGTCTTATTCAGATAAGCTATCTACACAACCTGATAATATGACGGAAATATCACCAGCAAACTCATCTCTGCCAGCTAACAAGCAAGCAACATGGCCTCTAAATCCCCCAGCAAAAGCGGACTTGGAGGTGGATGAAGTCAGTGCTGCATCTGGGCAAGCATGCATTTTCGGAAAATCAGACAGTGAGCCACTGAGTAGGTTTCTTCAAGAAAGGGTGAGATCTTTCTACCATAGTTGTGAAAATAAGGCTGAGAGCAGCTTATGGATACACAAGTACAAACCAACAAAAGCCTCCGAGGTATGTGGTAATGATGAATCTCTGAATTTCTTACGTGACTGGTTACATCTTTGGCACGAAAGACGTTGTCAAAACAGAAAGGGTTCCTCTAACAAGGATCAAACTGACATACCAAACGATGATGGTGATTATAACTTTCCTGGTTTTGGCTGTGCTTCAAAAGATGTTGATGAGGAGGGTTCCCTGAAGAATGTTCTTTTAATTACAGGACCAGTTGGGAGTGGCAAGTCTGCAGCTGTCTATGCTTGTGCCCGAGAGCAAGGGTTTGAGGTTTTAGAGCTCAATGCATCAGACTGTCGAAATGGGTCTGCTGTCAGGCAATATTTTGGAGACGCTCTTGGATCACATGGTTTCAAAAGGTCAGTGGAACACACTGTGAGTTCACACAAGAAAACTGTGAAATTGCTCCCAGCTCCAGCTTTTCCTAATGTTAAAGCTTCtgaagagatggatgatgatgtgattgaaatgataaccatatcggatgatgaagatcatAGTCCTAGTGGAACATCTCAGAAGTTACACGACATAAATAATGCACTTACATCTGATACTGTCCAAACTTTAATTCTAGTTGAGGATGTTGACATCCTTTTTCCTGAAGATCGGGGATGTATTGCTGCCATACAACACATTGCTGAGACAGCAAAAGGGCCAATTATATTGACCAGCAATAGTAAAAATGCTGGCCTTCCAGATAAATTTTTAAGACAACATATTTCTTTCTCATTGCCATTGCCGGATGAGTTGCTTTGCCATTTGTTCATGGTTTGTGTCACAGAAGAAGTCAACATCAATCCTCTTTTACTGGAGAAGTTTATCCAGTCTTGTGACAGGGATATTCGTAAAACCATTATGCATCTTCAGTTCTGGTTCCAGAATAAAAAATATAGCAAAGACAAGAATGTGCAGACCATATATGGCTCACTTCCCTTTGATCTTGAGGCTGGTCATAAGATACTACCAAAGATAATACCCTTGGATTTTCCCTCAGAGTTATCCAAACTAATTGAGAAGGAAGTTGCCAATTCAATAACCATAATGGAAAACAGCTCGAGCTGGGAAGGGTTAGTTAAGGAAGAGCTTTGCATAAATGACAAGCAAAATAACTTAGATGTGCCTTGTATGGGGACTGATTATTTAGAGCCCAAGGTAGAGGTCATGAAGACGATTACAGACTGTGGTGAGTTTGAAAGTCAACATAGTGCTACCTCTGAGCTATATAATTGTTCTGGATCCCCAGTAACATCCTTTTGGCCAAAGGATCAAAGGCAACTTGTAGTGATGTCCTCTGGTGCTATGGATAATAATTCATATAATAGACTTTCTGTAGACATTCATGACGAAGCTTACAGGAGACAATCCCTTGAAGGAAACAGTGAATCTTCCTTTAAGTTTCTATTGGATGAAAGCTATGCCAATATGTCATTTTCTGAGCTGCTGTTTTCTGGTTTGGAAGATTCAGAGGAGCAGCAGTGTAAATATTTAGAAACAACTTATGATGCATGCTTAAACAAAACATACAACTCATTCGATATGTCCTGTTTTCCGGAATCAAGATTTGTTTGTGAGACTGCCTTTCAAAATAGAATAGAAACAAAGTCTGGAGTAGTGTCTGCTGGACATCATGCTTATCCGGTAAATGTTTCTCTGGATAATGAGTTGACACCATTCTCCTTCAATCTTTGTCAGCGCTGGGCTGAAGTGCCTCAAGATCCAGATTTGTTGGTAAATACTGAAATTCCCAAATCTTCTCCAAGAGCAACTGCACAAGATTTTAGTGATGAGAACATGGAAATCCCACCTGTGTATAACACAATGGATGAGTGCAGTCACACTGGTTTTGAGTTGAAGTCAAAACTTGTTGATTTTAGTCCATCTACAGAGATAGACATGGTGCAAAATTTGTGGAGGAAACTTCGTGATTGTCGAACAGATTTAAGACAGCATGCTACCTCAGAACAGATAGGTGTTATCCAAGTTGTTAAACTTGCTAGTGGACTGAGCAATCTAATTTCAGAAGCTGATTTGTTGTTTCGTAACCACCAACAAAAACAATGTGGTATTATGGAACCTCCACTTTTTCTGTCTGATGAAGCCACATTTAGTTGGTATGATGAGCAAATGATGATGTCAACTGTTGCTGCGCATGGTTTTTGCTTTTATGCCAAGCATATAGTAGATGTGGGATCCAAATTGGGTTTTGAGAACAGGGTAGACACGACTTCGGAGATGTTGGCTTCTACTACAAATATTATGGCTTTGGGGAAGTTATCTAGACAGGACCACACTGAAAGCATGAATAACTATACTAAAAAGCTATTAGAGGTGAACAACTCAAGAAATGATAAGAGCAGAACATCTCTATTCAACGTAATCCAATCCATTGTTCCTGCAAGATCATCAATGGCAATTAGAGGCATTGCATTCAATGAGTTTCTTTCTTCACTACGCCAAATTTCAATTTCAGAAGGTTTGCGCATTTCAGAAGGTGTTAATAAGACGAGGAAAGGAAGGCGGAGTGCTCAACATTATTTGAGCAGAGGTACAATGATGTTGTCTTCTGAGGATATATCATTGGTCTGTGAAGGTGATTTGTACAGAAAGATATCTTCACAGTATGCTGCTAACATGGAAAAGCATGCTTCTTCGTTCCTCGAAAGGGCTCTTCAAATCTTTAATATGGAGAAGTTTGGCACTTCGTTCTGA 3603 0.3955 MNDPCHLSTPSKRRAEHELHASCTDQNNNKKRKSPTKVTSRKRTSRNNMPKKNASVKGIKETTSPDLARKIDLRLEAKLSAEENSRMFAGRQIHPFFSTWKVEKKFRESADSECSSSTAKGENGRTICGPIHVFEDFQDDTSFLDWNDWKFLENTTVVDFGPESSNLSVMEGSIESLNFDNFLSAVKPSRTSISQNALSYSDKLSTQPDNMTEISPANSSLPANKQATWPLNPPAKADLEVDEVSAASGQACIFGKSDSEPLSRFLQERVRSFYHSCENKAESSLWIHKYKPTKASEVCGNDESLNFLRDWLHLWHERRCQNRKGSSNKDQTDIPNDDGDYNFPGFGCASKDVDEEGSLKNVLLITGPVGSGKSAAVYACAREQGFEVLELNASDCRNGSAVRQYFGDALGSHGFKRSVEHTVSSHKKTVKLLPAPAFPNVKASEEMDDDVIEMITISDDEDHSPSGTSQKLHDINNALTSDTVQTLILVEDVDILFPEDRGCIAAIQHIAETAKGPIILTSNSKNAGLPDKFLRQHISFSLPLPDELLCHLFMVCVTEEVNINPLLLEKFIQSCDRDIRKTIMHLQFWFQNKKYSKDKNVQTIYGSLPFDLEAGHKILPKIIPLDFPSELSKLIEKEVANSITIMENSSSWEGLVKEELCINDKQNNLDVPCMGTDYLEPKVEVMKTITDCGEFESQHSATSELYNCSGSPVTSFWPKDQRQLVVMSSGAMDNNSYNRLSVDIHDEAYRRQSLEGNSESSFKFLLDESYANMSFSELLFSGLEDSEEQQCKYLETTYDACLNKTYNSFDMSCFPESRFVCETAFQNRIETKSGVVSAGHHAYPVNVSLDNELTPFSFNLCQRWAEVPQDPDLLVNTEIPKSSPRATAQDFSDENMEIPPVYNTMDECSHTGFELKSKLVDFSPSTEIDMVQNLWRKLRDCRTDLRQHATSEQIGVIQVVKLASGLSNLISEADLLFRNHQQKQCGIMEPPLFLSDEATFSWYDEQMMMSTVAAHGFCFYAKHIVDVGSKLGFENRVDTTSEMLASTTNIMALGKLSRQDHTESMNNYTKKLLEVNNSRNDKSRTSLFNVIQSIVPARSSMAIRGIAFNEFLSSLRQISISEGLRISEGVNKTRKGRRSAQHYLSRGTMMLSSEDISLVCEGDLYRKISSQYAANMEKHASSFLERALQIFNMEKFGTSF 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02904 1200 MobiDBLite consensus disorder prediction 9 32 - -
Car04g02904 1200 CDD AAA 351 407 - -
Car04g02904 1200 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 1 1177 IPR004582 GO:0006281
Car04g02904 1200 Gene3D - 544 606 - -
Car04g02904 1200 Gene3D - 283 541 IPR027417 -
Car04g02904 1200 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 1 1177 - -
Car04g02904 1200 MobiDBLite consensus disorder prediction 34 48 - -
Car04g02904 1200 MobiDBLite consensus disorder prediction 1 61 - -
Car04g02904 1200 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 284 606 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02904 Car-Chr4 56109648 56119018 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02904 282 433 Core DNA Replication Machinery Family AT5G22010 26.347 1.61e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02904 - - gmx:100815984 1410.97