Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02899 ATGGGTGGACTAACATATTGTGAGAAATTAAGTTTATGGTTATGCAATTCAAAGTCATATTTGCTAATAATAAGCTTGCAATTTGGTTCTGCTGGCATGTATGTTCTCACCATGGATGCTCTCAATAAGGGAATGAGTCATTATATTTTTGTTGTTTATCGTAATGTCATTGCCACCGTAGCTCTTGCCCCTTTTGCATTTTTTCTTGAAAGGAAAATTAGGCCCAAGATGACAGTTCGGATATTTTCAGAAATATTTGCACTGGCTTTTGTTGAGATAATACTTGATCAGTGCTTTACATTCTTGGGGATGAAGTTAACATCAGCATCGTTTGCATCTGCCGTGATGAATTCCGTACCCTCAATTACTTTTGTACTTGCAATCATTTTTCGATTGGAGAGAATGAAAATAAAAGAGATAGGATGCCAAGCGAAAGTGATAGGGACAGTGGTGAGTCTAGGAGGTGCATTTCTAATGGCACTATACAAAGGTCCTGTTCTTGAAATTGCAGGGTCATCAGCAGAAGCAAGCCACCCTGAAAATGTGAATGACCCCACAGGTGCACACTGGCTCATTGGTGCTTGTTTCCTCCTCATTGGTTGTGCTGGCTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGCTGAAATGTCCTTAGCCACGTGGGTTTGCTTTATTGGTGCGCTTCAAAGTACTGCTGTAACCGTTTTCATGGAGCGCCATACCCCTCATGCATGGGCTTTGGGCCTCGACTCTAGACTATTCGCTTCTGTATACGCGGGAATAGTAACTTCAGCGATCCAATTTTATGTGCAAGGCTCGGTAATTAAAACTATGGGCCCTGTGTTCGTCACTGCATTTAATCCCCTGCGTATGATTATAGTCACAGCCTTGGCTTGTATTGTCCTTTCAGAGAAACTCCACCTTGGAAGCATTGTTGGAGGAGTGGTAGTGGTTACAGGACTATATCTTGTTGTATGGGGCAAATCAAAAGAACAAAAAAATGTTATGATGTCAGAGTCCCCACAAAAAATCTCTCAACAACTACCAATTACTGTCCCACAAATTGATGACAATGAAAATAACAATAAACCTCAATTGGTCATAATTGGAGATCAAACAAGCAATGTGGAAGTCAAAGGATCAAGCACATAG 1179 0.3936 MGGLTYCEKLSLWLCNSKSYLLIISLQFGSAGMYVLTMDALNKGMSHYIFVVYRNVIATVALAPFAFFLERKIRPKMTVRIFSEIFALAFVEIILDQCFTFLGMKLTSASFASAVMNSVPSITFVLAIIFRLERMKIKEIGCQAKVIGTVVSLGGAFLMALYKGPVLEIAGSSAEASHPENVNDPTGAHWLIGACFLLIGCAGFXXXXXXXXXXXXXXXXXPAEMSLATWVCFIGALQSTAVTVFMERHTPHAWALGLDSRLFASVYAGIVTSAIQFYVQGSVIKTMGPVFVTAFNPLRMIIVTALACIVLSEKLHLGSIVGGVVVVTGLYLVVWGKSKEQKNVMMSESPQKISQQLPITVPQIDDNENNNKPQLVIIGDQTSNVEVKGSST 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02899 392 Pfam EamA-like transporter family 19 160 IPR000620 GO:0016020|GO:0016021
Car04g02899 392 Pfam EamA-like transporter family 226 334 IPR000620 GO:0016020|GO:0016021
Car04g02899 392 PANTHER WAT1-RELATED PROTEIN 14 358 IPR030184 GO:0016021|GO:0022857
Car04g02899 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Car04g02899 392 PANTHER WAT1-RELATED PROTEIN 14 358 - -
Car04g02899 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02899 Car-Chr4 56029951 56033434 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02899 18 364 Nodulin-like Gene Family AT2G39510 44.286 1.31e-106 317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02899 04 56029951 56033434 Car04g02899 04 56029951 56033434 ECH