Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02868 ATGACATCGGTCCTTTCCGATTGCTTGAGAGTTATAGCGGAGAAATTTCTGGATCTGACTATAGGCGAAGCACGTTACCTGTGTTGTTTCAATACCATAGTTGAAGAGCATGaaagggaaaagggaaaactgagagcaaaaaggaagggtgtaatggaaaatgtgaaTGTGGCGAAGAATAGAGCAGAAGAGATAGTGAATGATGTTACAGTTTGGATCCAGAATGCTGACAATATCATCAATGATAACAATGAAATGAAAAGGACTTGTTTTTCTGGATGGTGTATCAATTGCATGTGGCAATATCAAAGAGGCAAGGAACTAGCTGTAAAGACATTGGAGATTGCAGAACTGAAAGAACTTAACTTTGAAAGTGTCGGACGCGCTGGTAAGCTTCCAGGTGTGGAATATCACTCTTCACAAGATTTTATTGAATTTGAGAGCAGAACTTCCCAACATAAACAACTTTTAGAGGCACTTAAAAATGAAGAAAACTATATGGTTGGATTGCATGGTATGGGGGGGACTGGTAAAACAACATTGGTACAAAAAGTTGGTAATGAAGTCAAAAGATCAAACTTTTTTGATGAAGTCATCTTCACTACTGTGTCTCATGCTCCTGATATAAGAAAGATTCAAGACAACATTGCAACCCCTTTAGGTTTGAAACTAGAGGAAGGAGACCAGTTGCAAAGGGCCAAAAAACTATGGTCTAGATTAACTAATGGTGAAAGGATACTTGTAATATTAGATGATGTTTGGGAGGAGCTCAAGTTTGAAGATATTGGCATTCCCTCATGTAACAATCACAATGCATGTAGAGTTTTGATTACTTCGCGCATGATGAGTGTATGCAATTCAATGAGCTGCCAAAGCACCATTGATCTAGAGCTCTTATCTGAGGAGGATGCAAAGATTCTATTTGAAAAGCATACCGGATTAAGGGATGAATCACCCAAAAATTTGAAAAAATTGGCACAGCAAATTGCGAACGAATGTAAAAGATCGCCTGTTGCAATTACTGCTATAGCGAAAAGTTTAAAGCACCAGCCTCCAGAACTTTGGAAGGTAGCTTATAAAAGCTTGAAAGAATTTAAACAAATCCGTAACGTCGACGAAGATTTGAAGATCTATAAATGCTTTCAGGTAAGCTACGAGAATCTTAAGGACGAAAAGGCCAAGAAACTCTTCATGTTATGTTCTCTATTCCCTGAAGATTATGAAATTCGTGTGGAAGATTTAACCATATTTGGAAAAGGATTAGGCATATTTGGAGATGTTGACTCGTATGAAGCGGCAAGGATAGAAATGCTTACAGCAAAAAGGAAACTTCTAGATGCTTGTTTGTTGTTGAAAGGTCAAGAGGGATGTGTCAAAATGCATGACTTGGTACGTGATGCAGCACATTGGATAGGAAACTATGAGATTCAGGTGATTATGGGATCCAAAGTTCATGCAACAGCCAAAAAAGGTACCATAACATATTTGTATTGCCAAAATGTAAAAAGATTTTGCCTCCCCAATCAGTTGGATTGCACCAAAATTAAGATTTTAATAATACTTTGCTTAGACAAAGAAGGTTTTGTGGAAATGCCGCAAGCATTTTTCGAAGAAACGAAAGATCTAGAAGTTTTGGCTATATCCAAGGCAGAGAACATTAGGGGAAAGCCGAGTCTAGCTTTGCCAAGATCGATCGAAACCTTAAAAAATATCCGCACTCTATGCTTGAGAGGTTTTAATTTAGGTGATATTTCTATTCTGCAAAAACTAGAGATACTTGAGACTCTTGAGTTGAGTGATTGCTCAATCATTAGACTTCCCAAAGGGATGGTGAAGTTGGAGAAGTTGAGATTATTGGCTTTGACATGCTGTGCAATTGAAAAGAATCACTTTGAAGTGATTGGAAGACTTTCTCAATTAGAGGAATTGTATGTCATGAGAAGTCCAGACAGATTCAGATGGAAATTTGACAAAGAAGTTGTTGCTACCATTTTTGACAGAGACAACATTATCCCAACATTGCAGAGGTACCATATACAGATAGGACATGATTCTGGATTATATCACTCAGTGGATGATTCCATATCAAGAGCTTTGTCTATTGAATATTTTGACCCCAATTCAAATGCAACAATTAAGGACCTGGTTGAAAGAGCAGAGATTCTTCACTTGAAGAGGATTCAAGGAAATTATACAACTGTAACACCTCAACTAGTCGAAGCAATAGGAGGAGAAATGAATGACTTGATCAATCTCAAGCTTGAGTTTTGTTCTAAGATAGAATGCCTCATTGATACTAATAACTTTTCATCTTCCATAGGATCCATATTCTCCAAGCTGGTTAAAATAGAAATCAGAGGCATGGATAATTTGAAAGAACTATGCCACGGTCCACCTCCTTCTGACATATTCGGAAACCTGCAAGAGATGAGTATATATTTATGTCACCAATTGCATGGAAGATTATTTGAAGGAAACTTGAACCTTGGAAGAATTACGGTGTTTCAAGTGGAATACTGTCGCATGTTAACATCTATGTTCACGCCTTCCACAGCTGCAAGTCTAGTGCTGTTGGAAGAATTGGTAATAGAAGGATGCAAGGAACTGAGAAACTTAATATCATATGAGGAAGAAGAAAATAAACAAGAGCAAATAGTTCAGCATGATGATAATGATCAAAAAATTTATGGCTCAATTTTTCCAAAATTGAGAACTTTTGACTTAAGAATGTGTGACCAATTAGAATATATAATTACAAGAAAGGACTGCCTTGGACCCCTCAGTCCTTCAGATTGCCTTTCAAGACAGTCATTGATCCTGCGTCATGTCAGAGAGATGACACTCAAAAACTGTTTAAAAATAAAACTACTTTTCAATTTGTCTGTTGCTCGAAGTATGTTGTTGGAAGAATTGAGGATAAAGGAATGTCATTCGATGACGAGCATTGTAACAGATGTTGGAAATGATGAGAGTCATGTGACGTGTGGTTCTGTCTTCCCAAGATTGAAATTCCTGAGTGTTCAAGATTGTAGCCAAATGCAATATATGTTGGGACAAGACCATGAAGAACATAATAATGACATAGAGATTCATATTTATCTACCAGAATTGGAGCAACTAACTTTCTCTAGAGTACCGAAACTCATCAGTACTTGTTCCATAAACTATAATGCCACATATCCATCTTTGAAAGAGTTTTGTTTGGAAGAGTGTCCTGAGTTTACCATCAACTCTATTAGTGATTTCATATTTCATTTGGGTGCAAGACAATTGGCTGACACATCCACTGAGGACATAGGAAAAATGGAAAAGCATTTCCAAACTCTAGAAAAACTCTGCATTGAGAACTCAGACATTAAAGGGATTTTTAGTCTTGAAGAACTTCCAATCATTGGTCAACAAATGAGCTCAGGTTTGCAATCCCTTAAATTGTACAATCTACATGAACTAAGGTATACATTCATGGGTCCAAAACATTTTATAAGCCTCCAAAATATCAAAACTTTACAAATTGAGGGATGTAGTAAACTGAAAGTTATCTTCTCAGCATCTGTCTTGAGAAGCCTTCCACAGCTGACATATCTAGAAATCAACAACTGTGAAGCATTACAAAGAATAGTGGAAGAAGATGATGAAAATCAAAGCCAGACAAATCCTTATTCTCGAGTGGTAAGCTTCCCGAAACTCGTTGCAGTTGTCATCAAGTGTTGCCATAGTTTGAAAAGTCTCATCTCTGTCACCACATTCCGAGAGTTTCCAAAGTTAGAGCTCATGATCATAAAAGAAGCCTCTCAGTTAGATGACATGTTTAGAAGTGAACAAGGCGATGGGATTCCGGAGCAGAAACTTCGGCTTCCTAAACTCAAGTATCTAGTGCTTATGCAACTTCCAAACCTAGTTGATTTGAGCCAACAAATGGAATTGCAGAATGTGACTTACAGCATTATTCAGTATTGCCCAAAACTTTCTTTTGATTCAACAACTACTCTTGAGAACTTCAAGAATATATTAGAAGATAGTAACATTGACCACGAAGTCCATCGGGAGTTATTTGAAATATTTGACACCATCATGGAAGAAGCTGAAAATGAAAATCCAATGTCAGAAACCATTCCTCAATCACCAATAGTAGATGAAGTTCAAGATGTTGAGGTTCAATCAGCACCTCAAAGGGAGCTTCCTTGTTCACAGATTATTGATGAAGCAGATAAAGAAATTGTTGCTGCACATGATTCAAGAATGGAAACTTCATCAATAGATTTAGAAGTGATAACAATGCCTTATTCATTCCCTTCAGCTATCCTTCGATCCAAAAAAACACAGAGTACTAAAGAAACAGTAGAACAAAGTCTTCTTGAGTGTCCTAAGACAGAGAATGCCACAACAACAATATGGTTAACAAACTCAGAACCAAGCAATCCATCTCTGGGACCATTACTTATTCCTTTACAAAAGGAATCTTCACAGTCACCACAGTTGGTTGAAAAACAGTCAATAGATGAACAAATTACTATGGATCAAGGAACAATAAGAGAAACTAACAGCTTCAATGGAACTCCTGATGAACATTCCAACCTTACACAAAATGTTAAAATCTCTACAAATGGAAGTGTTTCTGAAGTAGTATTAAACAAAACTGCATTAGCAGTTCCATCATTTCCTGAGTTGGATGATTCGGCACTAGCTCTGATATCTCCAACCTCTGAAACCAATGTAACATGTTCCATTTCATTACCAATGCAAAGAATGTCAAGTAGCTTGTTGGAAGATATATTCAGCAAAAAAGCCAAAGTTGATCATTTTTCAAATGATACTGAAAACTCAAGTTCTAGTCTGATTCTTAAAGATGAACTATGTGTGTATCTCAACATGTCACTGGAGGATATTATTGACAATAATGTTTACAACAATGTAGAGAGAATTGTAAATTCTTTGGCAAAGGAAACTACAGATGCTTTCCAACGGAACATCCTCAAAGACTTCACAAATAGGTTGAAAATTTTCAAAGAAGGTGTTCCTAAAGCCATGAGCACATTGCAATCAAGCTCTGAGTTTATGTCCAATTATGAGAACCTTAATATGGAGTTGAAAGCCAAGTTGAATGAAGGACAAGAAAAAATTGAAAACTTGGAAACCAAACTTTCTGAGACATTGGCAAAAGAGTGTACTATTGATATGAAGATTAAAAAATTAATTAATCAGAAAAATGAGATTGTTGCACAGAAGAACTTCCTTGCATCTCAACTTGATATGTACACTAAGGTGGTGTCTAAGGATTATGAAAATTGGAAAGGTTTGGGAGAGGAACTGAATTCTTGCAGTGACAGGTGGTTAGAGTCTAAAGAAGATTTAGCTCATGCAAATGCTAGCTGGAAAATCTTAAAGGAGATTTTACTTTTATGA 5403 0.3639 MTSVLSDCLRVIAEKFLDLTIGEARYLCCFNTIVEEHEREKGKLRAKRKGVMENVNVAKNRAEEIVNDVTVWIQNADNIINDNNEMKRTCFSGWCINCMWQYQRGKELAVKTLEIAELKELNFESVGRAGKLPGVEYHSSQDFIEFESRTSQHKQLLEALKNEENYMVGLHGMGGTGKTTLVQKVGNEVKRSNFFDEVIFTTVSHAPDIRKIQDNIATPLGLKLEEGDQLQRAKKLWSRLTNGERILVILDDVWEELKFEDIGIPSCNNHNACRVLITSRMMSVCNSMSCQSTIDLELLSEEDAKILFEKHTGLRDESPKNLKKLAQQIANECKRSPVAITAIAKSLKHQPPELWKVAYKSLKEFKQIRNVDEDLKIYKCFQVSYENLKDEKAKKLFMLCSLFPEDYEIRVEDLTIFGKGLGIFGDVDSYEAARIEMLTAKRKLLDACLLLKGQEGCVKMHDLVRDAAHWIGNYEIQVIMGSKVHATAKKGTITYLYCQNVKRFCLPNQLDCTKIKILIILCLDKEGFVEMPQAFFEETKDLEVLAISKAENIRGKPSLALPRSIETLKNIRTLCLRGFNLGDISILQKLEILETLELSDCSIIRLPKGMVKLEKLRLLALTCCAIEKNHFEVIGRLSQLEELYVMRSPDRFRWKFDKEVVATIFDRDNIIPTLQRYHIQIGHDSGLYHSVDDSISRALSIEYFDPNSNATIKDLVERAEILHLKRIQGNYTTVTPQLVEAIGGEMNDLINLKLEFCSKIECLIDTNNFSSSIGSIFSKLVKIEIRGMDNLKELCHGPPPSDIFGNLQEMSIYLCHQLHGRLFEGNLNLGRITVFQVEYCRMLTSMFTPSTAASLVLLEELVIEGCKELRNLISYEEEENKQEQIVQHDDNDQKIYGSIFPKLRTFDLRMCDQLEYIITRKDCLGPLSPSDCLSRQSLILRHVREMTLKNCLKIKLLFNLSVARSMLLEELRIKECHSMTSIVTDVGNDESHVTCGSVFPRLKFLSVQDCSQMQYMLGQDHEEHNNDIEIHIYLPELEQLTFSRVPKLISTCSINYNATYPSLKEFCLEECPEFTINSISDFIFHLGARQLADTSTEDIGKMEKHFQTLEKLCIENSDIKGIFSLEELPIIGQQMSSGLQSLKLYNLHELRYTFMGPKHFISLQNIKTLQIEGCSKLKVIFSASVLRSLPQLTYLEINNCEALQRIVEEDDENQSQTNPYSRVVSFPKLVAVVIKCCHSLKSLISVTTFREFPKLELMIIKEASQLDDMFRSEQGDGIPEQKLRLPKLKYLVLMQLPNLVDLSQQMELQNVTYSIIQYCPKLSFDSTTTLENFKNILEDSNIDHEVHRELFEIFDTIMEEAENENPMSETIPQSPIVDEVQDVEVQSAPQRELPCSQIIDEADKEIVAAHDSRMETSSIDLEVITMPYSFPSAILRSKKTQSTKETVEQSLLECPKTENATTTIWLTNSEPSNPSLGPLLIPLQKESSQSPQLVEKQSIDEQITMDQGTIRETNSFNGTPDEHSNLTQNVKISTNGSVSEVVLNKTALAVPSFPELDDSALALISPTSETNVTCSISLPMQRMSSSLLEDIFSKKAKVDHFSNDTENSSSSLILKDELCVYLNMSLEDIIDNNVYNNVERIVNSLAKETTDAFQRNILKDFTNRLKIFKEGVPKAMSTLQSSSEFMSNYENLNMELKAKLNEGQEKIENLETKLSETLAKECTIDMKIKKLINQKNEIVAQKNFLASQLDMYTKVVSKDYENWKGLGEELNSCSDRWLESKEDLAHANASWKILKEILLL 1800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02868 1800 SUPERFAMILY L domain-like 456 920 - -
Car04g02868 1800 PANTHER NBS-LRR TYPE DISEASE RESISTANCE PROTEIN 14 1075 - -
Car04g02868 1800 PANTHER NBS-LRR TYPE DISEASE RESISTANCE PROTEIN 1056 1267 - -
Car04g02868 1800 SUPERFAMILY RNI-like 933 1120 - -
Car04g02868 1800 Pfam NB-ARC domain 154 387 IPR002182 GO:0043531
Car04g02868 1800 SMART AAA_5 164 318 IPR003593 -
Car04g02868 1800 PANTHER - 1056 1267 - -
Car04g02868 1800 PANTHER - 14 1075 - -
Car04g02868 1800 Gene3D Ribonuclease Inhibitor 493 896 IPR032675 -
Car04g02868 1800 Gene3D - 131 295 IPR027417 -
Car04g02868 1800 Gene3D - 298 384 IPR042197 -
Car04g02868 1800 Coils Coil 1686 1720 - -
Car04g02868 1800 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 400 IPR027417 -
Car04g02868 1800 Coils Coil 34 54 - -
Car04g02868 1800 Gene3D - 385 469 IPR036388 -
Car04g02868 1800 SUPERFAMILY RNI-like 1101 1303 - -
Car04g02868 1800 PRINTS Disease resistance protein signature 167 182 - -
Car04g02868 1800 PRINTS Disease resistance protein signature 240 254 - -
Car04g02868 1800 PRINTS Disease resistance protein signature 333 347 - -
Car04g02868 1800 PRINTS Disease resistance protein signature 588 604 - -
Car04g02868 1800 Gene3D Ribonuclease Inhibitor 930 1256 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02868 Car-Chr4 55568346 55578031 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02868 168 477 WRKY Transcription Factor Family AT5G45050 26.769 2.20e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02868 - - mtr:MTR_1g031830 2891.68