Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02861 ATGGAAAGAGATTTCTTGGGTCTATGCTCAAAAGAATCATTATCTCTACCAAAGGAACAATTTAACAATGAAGGGTGCAAAGATTCAGGATTTACACAAGTTTCAGCAGTAAAATGGCCCTTCTGGAACAAAGTCTCTGCTCATTCATATTTGATGCCTTTTAATGTTTCGGAAGAAGAAAAGCGCGCCACTGCTGGTGGATTACAGAAATCTTTCAAACATGATGGACAAGGTGGCATTCATTATTCCCTGAATCCATATCCTGTACAACACAATGTGAGTTATGCAAATCGTCCTCACGATGTGAAGATGTTTTCAGTTTCTGTGGGAAGTCCGTTCCTAAAGAATCATTTTGCAACTGTTGGTCAGAATATGAATGGTGCTAATGTGATGCAACCACTATTTGGAGGATTATTACCTGTTACAGCACCTCATTCAGTTCTTCCGATTGTTGGTACTGTCACTAGTTCGGCTGAACCATGTGTGAAACCATCTGCACCTGCTCCTCAACTTACCATCTTCTATGGCGGTACTGTTAACGTTTTCAATGATATCACTCCTGAGACGGCACAAGCCATTATGTTGTTGGCTGGAAATGGCGTATCTGCATCTTTAGATGGGGCCCAACCTGAAGTTCAGGCACCGATCTCGAAGTTTGCATCAGGTGATGATGTGCCTATGAGTCCACCTGCAGATATACCACCCTGCTCTGGTATTTCAAGTCCTTTATCTGTTTCTTCGCACACCGGTCCACCGTTTGGGAGTGGTGCAAGTAGCAGCGATGAATTCCTTGATGCTAAACCATCCAAAGGTCCTACTCCTACCATTTCTGTCAGCAAAGTGGAGACTCCAAAAATAGTCAATGCAACCACCATGTTTCCATCAGCTATACCACAGGCTCGCAAAGCATCACTGGCTCGATTTTTGGAGAAGCGCAAGGAAAGGGTCATGAGTGCAGCACCATATAACCTCAACAAGAAATCTGAGGATGCACCAACACCAAATTCAATGGTTGCTAACGTCTCTGCAACTACCGGTACCAAAACACCGTCAGCGAAGCAAGGATAA 1068 0.4382 MERDFLGLCSKESLSLPKEQFNNEGCKDSGFTQVSAVKWPFWNKVSAHSYLMPFNVSEEEKRATAGGLQKSFKHDGQGGIHYSLNPYPVQHNVSYANRPHDVKMFSVSVGSPFLKNHFATVGQNMNGANVMQPLFGGLLPVTAPHSVLPIVGTVTSSAEPCVKPSAPAPQLTIFYGGTVNVFNDITPETAQAIMLLAGNGVSASLDGAQPEVQAPISKFASGDDVPMSPPADIPPCSGISSPLSVSSHTGPPFGSGASSSDEFLDAKPSKGPTPTISVSKVETPKIVNATTMFPSAIPQARKASLARFLEKRKERVMSAAPYNLNKKSEDAPTPNSMVANVSATTGTKTPSAKQG 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02861 355 SMART tify_2 164 199 IPR010399 -
Car04g02861 355 MobiDBLite consensus disorder prediction 320 355 - -
Car04g02861 355 MobiDBLite consensus disorder prediction 239 256 - -
Car04g02861 355 ProSiteProfiles Tify domain profile. 164 199 IPR010399 -
Car04g02861 355 MobiDBLite consensus disorder prediction 220 277 - -
Car04g02861 355 MobiDBLite consensus disorder prediction 328 355 - -
Car04g02861 355 PANTHER PROTEIN TIFY 7 17 347 - -
Car04g02861 355 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 347 IPR040390 -
Car04g02861 355 Pfam tify domain 167 198 IPR010399 -
Car04g02861 355 Pfam Jas motif 298 322 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02861 Car-Chr4 55439627 55445093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02861 37 328 Tify Gene Family AT3G17860 37.618 2.94e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Car04g02861 tify 1.7e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02861 K13464 - gmx:100799314 377.096