Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02845 ATGAGTTGTATAGTCTTGTTGGAACGCTGCTCCGAAAGCACAACACCGTCGGAGGCGGTGCAAGCGACGGAGGCGGCGCTTGAACTCGAGGAGAGTCATGACAGTTGGGGATACTCAAAGCCTGTGGTAGCGTTCGACATTTTGTTGAACATGACGTTCGTTGTGGCAACTGCGGCGATACTGCCGTGCTCCGGACGTGAGCGTCGGAATACGCCGATAAGAGTTTGGATTGTCGGCTATGCGCTGCTGTGTTTCTTCCACTCCGTGCTGGTGTGGCTTGAGTACCGGCGGAGGCAGAGTGATAGCGGCGATGAAACAACTTCCGACGGAAACAATAACAGCCACGGCGACCAGAACTCGTCTTCTCAGCCCAGATTCACAAAGCGATGTGCATTAATAAATACTGGGGTTTCAGTCGTTTGGTGGATGGCGGGCATTTACTTCGTTATCGGTGGTGGTGATATCTTTAAGCAACATGATCCACGTTTGTACTGGTTGGCTCTTGTATTTCTCGCATCTGATATCATCATCTGTGCTATTGTGGCGTTCATGCTTTTCATCGTTTTATTTATATGTTGTCCCTGCATCACTGCTGTTCTCTATAACAAACCGGTAGGTGCATCAGAAGAAAATCTTAGTATACTTCCAAAATACAGATTTCAAATAGTAAGCAATGAGGAAAAAGCTAGTAGTGGTGGATTTGGATCAATAGTTCCGGTCAAAACTACCACTGGACACGTGGCAAATGAAAGAATGCTTTTACGTGAGGATGCGGAATGCTGTATATGCATCCATCCATATGAAGATGGAGTAGAGCTACAAATTCTTCCTTGCAACCATCATTTTCATTTTTCATGTATAGTCAAATGGCTAAAGATTAATGCCACTTGTCCTCTTTGTAAGTACAATATTCTCAAAGGAATCGAACAAGTTTAA 936 0.4519 MSCIVLLERCSESTTPSEAVQATEAALELEESHDSWGYSKPVVAFDILLNMTFVVATAAILPCSGRERRNTPIRVWIVGYALLCFFHSVLVWLEYRRRQSDSGDETTSDGNNNSHGDQNSSSQPRFTKRCALINTGVSVVWWMAGIYFVIGGGDIFKQHDPRLYWLALVFLASDIIICAIVAFMLFIVLFICCPCITAVLYNKPVGASEENLSILPKYRFQIVSNEEKASSGGFGSIVPVKTTTGHVANERMLLREDAECCICIHPYEDGVELQILPCNHHFHFSCIVKWLKINATCPLCKYNILKGIEQV 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02845 311 MobiDBLite consensus disorder prediction 103 123 - -
Car04g02845 311 SUPERFAMILY RING/U-box 248 306 - -
Car04g02845 311 Pfam Ring finger domain 259 301 IPR001841 -
Car04g02845 311 MobiDBLite consensus disorder prediction 105 123 - -
Car04g02845 311 PANTHER TARGET OF ERK KINASE MPK-1 17 311 - -
Car04g02845 311 SMART ring_2 260 300 IPR001841 -
Car04g02845 311 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 239 307 IPR013083 -
Car04g02845 311 ProSiteProfiles Zinc finger RING-type profile. 260 301 IPR001841 -
Car04g02845 311 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 17 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02845 Car-Chr4 55244246 55246962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02845 5 310 C3H Transcription Factor Family AT1G68070 51.438 3.82e-107 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02845 - K13148 cam:101505220 645.58