Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02827 ATGGGGATGCATAATTTATCAAATGAAAAGAAAAAAGATTGGCTTGATGCACTTTTGATAGATAACTTTGGTAATTGCAAAAAACATAAAGAAAAGTTTAATGAGAAGAATGTGTTTTGTCTAGATTGTGGAATTAGTTTATGTAGACATGGTAAAGATTCTCATTCTCTTCATCGAAGATTTCAAATATACAAATATTGTTATCAAGATGTTGTCAGATATTCTGACTTACTCAAGTATTTTGATTGCTCAAATATTCAGACTTATATATCAAACAATGACAAGATTGTTCATCTCAAACCAAGGCCTTCAAAAGAGAAGAAACAAGTAATAATAAGATCAAAATTTGCTTCTCAAAACCATGATGAGTCACAAATGAAGGAAACAAATATTACAACACCTCAAAAGCCAGCTGGCACTTGTGAAGAATGTGGCAAACATTTACAAGATAAGCGTAATCAATTTTGCTCCATTAAATGCAAGATCACAGGAGAGGAAGAGATTGGAATCAACCAAAATTCAGAAGTTGAGTCATCTATTTCTATAGCTGAACCTTATGAATATGTTGAAAGAGTGAATTTAAGAAAACGTCCAAGGAAAACTACTCCTATGAGATCTATCTCTAGTTTTGTGTTTTGA 639 0.3146 MGMHNLSNEKKKDWLDALLIDNFGNCKKHKEKFNEKNVFCLDCGISLCRHGKDSHSLHRRFQIYKYCYQDVVRYSDLLKYFDCSNIQTYISNNDKIVHLKPRPSKEKKQVIIRSKFASQNHDESQMKETNITTPQKPAGTCEECGKHLQDKRNQFCSIKCKITGEEEIGINQNSEVESSISIAEPYEYVERVNLRKRPRKTTPMRSISSFVF 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02827 212 Pfam PLATZ transcription factor 65 162 IPR006734 -
Car04g02827 212 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 184 - -
Car04g02827 212 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02827 Car-Chr4 54924531 54926354 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Car04g02827 PLATZ 1.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02827 - - gmx:100820425 256.914