Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02825 ATGGGTTTGGGAGTTTCGTACGttgtgttgttttgtttgatgtttgttttTGCATGGTCTCAAGATGATGATGTGATGCAAAAACTGAAAAAAGCTATAAGTACTCCAATTGTTGGTTGGTCTGATTCAGACATTTGCAAATGGGATGGTGTTAGGTGTGATGGAAAAAGGGTGaaatcaattcaaatgaatcaaatcaTTGAAGGTACTTTGCCAAAAGAATTGGTCCAACTCACTGAATTAAAATATTTTGATTTCATGGGTTGTCAATTATCTGGTTCTTTTCCTTACATGCCAAATTCACTTCAAAATTTGCGTATTTCCAGCAATAATTTCACTTCCATACCTAATGATTTCTTCAACAACATGACTAATTTGAAAGAGGTGAGAATTGATTCAAACCCTTTTTCTCAGTGGGAAGTTCCTTCTAGTCTTAAGAATTGTTTAGCTCTTCAAACTTTTTCTGCTGTAAATGCTGGTTTTGTTGGTACAATACCTGAATTCTTTGGAAACAATGGTCCTTTTCCTGGTTTGGTTGATTTGTTTTTGTCTTTCAATTCATTTGAAGCTGCTTTACCTCTTAGTTTTGCTGGTAGTTCTATAGAGAAACTTTGGCTCAATGGTCAGAAGAGTAATAATAAACTCAATGGTACAATTTCTGTTTTGCAAAATATGACATCATTGACACAAATTTGGGTACATGGTAATTCATTTACAGGTCCTATACCTGATTTTTCAAATCATGATCAATTGTTTGATGTTAGTTTAAGGGATAATCAATTAACCGGTGTTGTTCCGCCGTCTTTGACTTCTCTTAATAGTTTGAAGGTTGTGAATTTGACAAACAATTATCTTCAAGGTTCGCCTCCGAAGTTTCAAGATGGTGTGCGTGTTGATAATGATATGGTTAGAGGGAATAATAGGTTTTGTACTTCAAAGGTTGGTCAACCGTGTAGTCCACTTGTTAATGCTTTGCTTTCTGTTGTTGAACCTTTCGGTTATCCTTTGGCTCTTGCGGATAGTTGGCAAGGTAATGACCCTTGTAATGGTAATAATTGGATAGGGATTGTTTGTTCTGGTGGTAACATTTCGATTATCAACTTTCAAGACATGCATTTTTCGGGTAGTATTTCGCCTAGTTTTGCAAGCCTTACCTCTTTGACAAAGTTGCTTCTTGCTAAAAATAATCTCACTGGTACTATACCAAAGGAACTTGCTAGCATGCCTCATTTGAAAGAACTAGATGTTTCGAATAATTTATTGTATGGTGAGATACCATCGTTTCGAGGAGATGTGGTTGTTAAAACTGGTGGGAATCCTGATATTGGAAAGGATAAAAAACCTCCAGGTCCGTCCGGCCCTAGTTCTGGAGGTGAAGATAAGAAGAAACttggtgttggagctattgttggtattgtggttggaattgttgGATTACTTGGTGTAGCGGTTTTGGTGTTTGTTATGTACGGTAGAAGACGGAAGCGTGATGGTAAAGTTCAAAGTCCGAATGCGATAGTTGTGCATCCTCATCATTCGGGAGATGGAAAGAGTTTGAAGATAAGTGTTGCAGCATCTGGAAGTTCTTGTGGTCGTGTTGTTGAAGGAACTAGTACTGCATTTAGTCCGTCAAGTAGTGTTCAAACTGTGGAAGCAGGTAATATGGTGATTTCCATTCAAGTTTTGAGAGAGGTCACAAACAATTTTAGTGAAAAGAACATATTGGGGAAGGGCGGTTTCGGCACTGTGTACAAAGGAGAATTGGACGATGGAACAAAGATTGCAGTTAAAAGGATGCAATCTGAAATGGTCGGTGACAAAGGACTGACTGAGTTCAGGTCTGAAATCGCGGTTCTTACCAAGGTTCGGCACAGGCATTTGGTTGCGCTACTTGGCTATTGCTTGGATGACAATGAGAAACTTCTTGTCTATGAATACATGCCTCAAGGGCCTCTTAGTCAACATCTCTTTGAATGGAAAGATGACGGGTTGGAACCGCTTGGATGGAAGAGAAGGCTTTCCATTGCCTTAGATGTTGCTCGAGGTGTTGAATATCTTCATGGGTTGGCTCAGCAAATTTTCATCCATAGGGACCTGAAACCATCAAATATCTTGCTTGGAGATGATATGCGTGCTAAAGTATCTGACTTTGGATTGGTTCGCCTTGCTCCAGAAGGACAAGCCTCATTCGAGACTAGACTTGCTGGAACTTTTGGATATCTCGCACCAGAGTATGCAGTGACCGGACGAGTCACCACAAAGGTCGACGTATACAGCTACGGCGTGATTCTTATGGAGATGGTAACTGGAAGGAGAGCAATTGACAACAGCCAACCAGACGAGAATGTCCACCTTGTTACATGGTTCCGCAGGATGCTAATAAACAAAGACTCGTTTGCAAAAGTCATCGATCCTGCAATGGAAATCGACGAGGAAGGCTTAGAGAGTTTCAAGACTATTGCAGGGTTAGCTAGTCAGTGTTGTGCAAGGGAGCCTTATCAGCGTCCTGACATGGGACACGTAGTGAATGTGTTAGCACCTCTTGTCGAGATTTGGAAGCCGACCGAACCTGATGCTGAAGACTTGTTTGGGATTGATTTGGATATGACATTGCCTCAAGCACTAAGTAAGTGGAAGAATTTTGAAGGAAGGACTAACACCTTCGATAGTTCGTATTCTTCGTCGATGATTACTAGTTGCGAGAATACACAGTCTAGTATACCGCCTCGATCTTCTGGATTTGCCGATTCCTTTACATCAGCTGATGCACGATGA 2775 0.3935 MGLGVSYVVLFCLMFVFAWSQDDDVMQKLKKAISTPIVGWSDSDICKWDGVRCDGKRVKSIQMNQIIEGTLPKELVQLTELKYFDFMGCQLSGSFPYMPNSLQNLRISSNNFTSIPNDFFNNMTNLKEVRIDSNPFSQWEVPSSLKNCLALQTFSAVNAGFVGTIPEFFGNNGPFPGLVDLFLSFNSFEAALPLSFAGSSIEKLWLNGQKSNNKLNGTISVLQNMTSLTQIWVHGNSFTGPIPDFSNHDQLFDVSLRDNQLTGVVPPSLTSLNSLKVVNLTNNYLQGSPPKFQDGVRVDNDMVRGNNRFCTSKVGQPCSPLVNALLSVVEPFGYPLALADSWQGNDPCNGNNWIGIVCSGGNISIINFQDMHFSGSISPSFASLTSLTKLLLAKNNLTGTIPKELASMPHLKELDVSNNLLYGEIPSFRGDVVVKTGGNPDIGKDKKPPGPSGPSSGGEDKKKLGVGAIVGIVVGIVGLLGVAVLVFVMYGRRRKRDGKVQSPNAIVVHPHHSGDGKSLKISVAASGSSCGRVVEGTSTAFSPSSSVQTVEAGNMVISIQVLREVTNNFSEKNILGKGGFGTVYKGELDDGTKIAVKRMQSEMVGDKGLTEFRSEIAVLTKVRHRHLVALLGYCLDDNEKLLVYEYMPQGPLSQHLFEWKDDGLEPLGWKRRLSIALDVARGVEYLHGLAQQIFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGQASFETRLAGTFGYLAPEYAVTGRVTTKVDVYSYGVILMEMVTGRRAIDNSQPDENVHLVTWFRRMLINKDSFAKVIDPAMEIDEEGLESFKTIAGLASQCCAREPYQRPDMGHVVNVLAPLVEIWKPTEPDAEDLFGIDLDMTLPQALSKWKNFEGRTNTFDSSYSSSMITSCENTQSSIPPRSSGFADSFTSADAR 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02825 924 MobiDBLite consensus disorder prediction 900 924 - -
Car04g02825 924 ProSiteProfiles Protein kinase domain profile. 569 849 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02825 924 SMART LRR_typ_2 384 407 IPR003591 -
Car04g02825 924 SMART LRR_typ_2 272 294 IPR003591 -
Car04g02825 924 SMART LRR_typ_2 98 122 IPR003591 -
Car04g02825 924 SMART LRR_typ_2 408 430 IPR003591 -
Car04g02825 924 SMART LRR_typ_2 175 198 IPR003591 -
Car04g02825 924 Gene3D Ribonuclease Inhibitor 321 446 IPR032675 -
Car04g02825 924 Pfam Protein kinase domain 570 843 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02825 924 SUPERFAMILY Protein kinase-like (PK-like) 545 856 IPR011009 -
Car04g02825 924 MobiDBLite consensus disorder prediction 436 460 - -
Car04g02825 924 SUPERFAMILY L domain-like 323 428 - -
Car04g02825 924 Pfam Leucine rich repeat N-terminal domain 323 359 IPR013210 -
Car04g02825 924 Pfam Leucine rich repeat N-terminal domain 21 54 IPR013210 -
Car04g02825 924 Gene3D Transferase(Phosphotransferase) domain 1 647 859 - -
Car04g02825 924 ProSitePatterns Serine/Threonine protein kinases active-site signature. 694 706 IPR008271 GO:0004672|GO:0006468
Car04g02825 924 Gene3D Phosphorylase Kinase; domain 1 533 646 - -
Car04g02825 924 SUPERFAMILY L domain-like 24 311 - -
Car04g02825 924 PANTHER OSJNBA0070M12.3 PROTEIN 5 924 - -
Car04g02825 924 Pfam Leucine Rich repeats (2 copies) 385 426 IPR025875 -
Car04g02825 924 ProSitePatterns Protein kinases ATP-binding region signature. 575 597 IPR017441 GO:0005524
Car04g02825 924 SMART serkin_6 569 849 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02825 924 CDD STKc_IRAK 575 848 - -
Car04g02825 924 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 5 924 - -
Car04g02825 924 ProSiteProfiles Leucine-rich repeat profile. 101 122 IPR001611 GO:0005515
Car04g02825 924 Gene3D Ribonuclease Inhibitor 20 316 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02825 Car-Chr4 54906987 54910621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02825 77 858 Receptor kinase-like Gene Family AT1G55610 32.254 1.14e-84 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Car04g02825 Pkinase 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02825 - K00924 gmx:100776064 1258.43