Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02823 ATGGTTAGTTTGGGAGTAGAGCAAGCAAATGGTAATAGGATGTTTGCACAGTCTTATTTCCCTACTCAATCAATACAAGTAGACCCAACAGGACATGGAAATTTTTTAACCATACAATCAGCTATAGATTCAATCCCTTCAAACAATAAATTTTGGACTGCCATCAATGTAAAGGCAGGCACCTACAGGGAGAAAGTGAAGATTCCAATTGACAAGCCTTACATATTACTACAAGGAGAGGGAATAAGCAACACTTTTGTTGAATGGGATGACCATGATAATACTGCACAAAGCCCTACCTTTTATACTATGGCTGACAATATTGTGGTCAAGTATATCAGCTTTAAGAATACATATAATGACCCACCAAATAAAAATCCAGTGGTACCAGCCGTAGCAGCTCTGATAAGTGGTGACAAATGTTACTTCTATAATGTTGGTTTCTATGGTTTTCAAGACACTTTATGGGATGATCAAGGAAGACATTACTTCAAGCGTTGTATTATCCAAGGTGCTGTTGATTTTATTTTTGGTGCTGGCCAATCTTTATATGAGGAAAGTTACATTGTGGTGACTGCAGCAGCACTAGGACCAGGAATATCTGGAATTATAACAGCACAAGGGAGAACAAGTCCAGAGGATGCAAATGGTTTTATTTTTAAACAATGTCAAATTTATGGAGATGGAACAACATTCTTAGGAAGACCATGGAGAGCTTATGCTAGAGTTCTTTTTTATGAATGCTCTATGACTAACATTATTGAACCTGCTGGTTGGCAACCTTGGAATTTTGTTGGTCATGAGGATCGTATTGAATTTGCAGAGTATGGTAATATTGGACCGGGTTCTAACACATTCAATAGAGTCAATTGGGCTAAGCAATACAATGGTCAAACAGTTAATTCATTGGCAAGTCTAAGATTTATTGATGAAGATGGTTGGCTTGAGCATGAACAATTCTAA 963 0.3738 MVSLGVEQANGNRMFAQSYFPTQSIQVDPTGHGNFLTIQSAIDSIPSNNKFWTAINVKAGTYREKVKIPIDKPYILLQGEGISNTFVEWDDHDNTAQSPTFYTMADNIVVKYISFKNTYNDPPNKNPVVPAVAALISGDKCYFYNVGFYGFQDTLWDDQGRHYFKRCIIQGAVDFIFGAGQSLYEESYIVVTAAALGPGISGIITAQGRTSPEDANGFIFKQCQIYGDGTTFLGRPWRAYARVLFYECSMTNIIEPAGWQPWNFVGHEDRIEFAEYGNIGPGSNTFNRVNWAKQYNGQTVNSLASLRFIDEDGWLEHEQF 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02823 320 Gene3D - 21 320 IPR012334 -
Car04g02823 320 PANTHER PECTINESTERASE 10-RELATED 17 318 - -
Car04g02823 320 Pfam Pectinesterase 26 310 IPR000070 GO:0030599|GO:0042545
Car04g02823 320 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 17 318 - -
Car04g02823 320 ProSitePatterns Pectinesterase signature 2. 169 178 IPR033131 -
Car04g02823 320 SUPERFAMILY Pectin lyase-like 21 317 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02823 Car-Chr4 54884625 54886917 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02823 23 268 Carbohydrate Esterase AT2G19150 46.154 2.85e-75 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02823 - - aprc:113870328 433.335