Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02811 ATGATGATTCCAAATTTGAATCTCGAAGCCGAAAACAGTTTAGAAGTAAGCAGTCAAGTAGGTTCCAACCTATACTTACAAGAAACATCTCATGATCTTACAAAAGACAGTGCCACAACTTCTTCCTGTCTTACAAATCTCACTAAGCCTGACATTGATCCAGGTCCCGTTTCCCTCGACCTCACCCTAAACTTCATTAATCCGAGCGACGAAGACTCAAAGGAAACAAGCGACACCAACAGCGAAACAAAAGCCGAGGCTCACGCTGCTAATTCAGCTCTGCGAGTTCACAGAATTTTCTCTTGTAATTATTGCAAGAGGAAATTCTTTAGCTCGCAAGCGTTAGGCGGACATCAAAACGCTCACAAAAGGGAGAGGACAGTGGCAAAACGCGCTATGCGAATAGGAATGTTCACCGAAAGGTATACGAGCTTAGCTTCTTTACCTCTTCACGGTTCTTCTTTTCAGTCTCTTGGTATTATTGAAGCTCATGCTGCAATGCATCAAAAACAAATGCAATCATCATCGTCGATGAAGGCTCCTGCAGCAAAATTCGAGAAAGAATGTTTCGGTGCAGCATCGATGTTGATGCATAATGACCACGATGTTGGTATATTTTGGCCTGGAAGTTTCAGACAGATAGATGAAAATGCTGGTATTAATTTGAGGTATCAAAATGCTCATAGTTCAAATTTGAATACTATTTTTGTAGCGAAATCGCCACTTCCTCCTCCACAAACATCTACATCTCCTGATCTCACTCTGAGGCTTTAA 774 0.4173 MMIPNLNLEAENSLEVSSQVGSNLYLQETSHDLTKDSATTSSCLTNLTKPDIDPGPVSLDLTLNFINPSDEDSKETSDTNSETKAEAHAANSALRVHRIFSCNYCKRKFFSSQALGGHQNAHKRERTVAKRAMRIGMFTERYTSLASLPLHGSSFQSLGIIEAHAAMHQKQMQSSSSMKAPAAKFEKECFGAASMLMHNDHDVGIFWPGSFRQIDENAGINLRYQNAHSSNLNTIFVAKSPLPPPQTSTSPDLTLRL 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02811 257 PANTHER ZINC FINGER PROTEIN JAGGED 6 257 IPR045320 GO:0003700
Car04g02811 257 PANTHER ZINC FINGER PROTEIN 3-RELATED 6 257 - -
Car04g02811 257 ProSiteProfiles Zinc finger C2H2 type domain profile. 100 127 IPR013087 -
Car04g02811 257 SUPERFAMILY beta-beta-alpha zinc fingers 98 127 IPR036236 -
Car04g02811 257 MobiDBLite consensus disorder prediction 67 86 - -
Car04g02811 257 ProSitePatterns Zinc finger C2H2 type domain signature. 102 122 IPR013087 -
Car04g02811 257 Gene3D Classic Zinc Finger 75 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02811 Car-Chr4 54635397 54636170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02811 98 257 C2H2 Transcription Factor Family AT1G66140 41.209 1.74e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car04g02811 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02811 - - cam:101511411 483.026