Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02810 atgtcaaaatccattgattttccagattgttacaattataagccaccaattacaatcaccccatctgcaccaacaccaaatcactctctttatctctctaatcttgatgacctaatgtaccagaggctttacttcagtgagatttatatcttcaagaaatctgtaaaggcagatatcttaaaatcttctttatcaagagttttggtggattactaccctgtagctgggaggttgaggacaagcagtgaggatgagaacaagttggtggtggattgcaatggagaaggtgttttgtttgctgaggcttccatggatatcactgctgaagaattactcattccttgcatgacacaacataagtcattgaagaaacttaagtgcaaggggaatactaaaaaaatgttagataatcctcttcttctaattcagGTGACGAATCTTCGTTGCGGAGGAATGATGTTATTCATATCGTTTAATCATGTCTTGTTGGATGGCACTGGCATATCACAATTTTTGAATGATTGGGCTCATCTTACCAAAAATCCCAATAGTAATTTGACAATTAAACCTTATCATAATCGAGAAATGTTGAAAATTCGAGAACCCCCACAAATAAAAGTCCCTCACCCAGTATACATCAAAAAACCGGAACATACTAATCCTGAACGAAACTATTTCATGTGGTTCATAACCCAGACAATTGTCCATACATCAATCACCTTTGGAGCCAACGAGATACTTCGCTTAAGAAAACAATGTACAACGTCATTATTCAAGTACGTCACAGACTTTGAAGTGATACTAGCACACACATGGCGCTCAATGACAAAATCTTTGAACATGTCTCCAACACGTGTGGTGAATATTTGTTTCACTGCAAATATTAGAAAGAAATTGAAACTTCCAAAAGGATTTTATGGGAATGCGTTTATTATCGTTTCCGCTGAGAGCACAGTGAAGGATTTAGTGAATTCTAATAATCTAGATTACTGTATAAAATGTGTGCAACAAGCCAAGAGTTATTTGGATGATGAGGAGTATATTAGGTCATCAATTGATTTGTTGAAGGACAAAACATTAATTGTCAATGAATCCACTAATGCTTTTGTATCACAATTAAATAAATTAGGGATTCAAGATTTGGATTTTGGAGAAGGGAAGCCTTTTCATGTGGACACTTTTGGTATTAATTCTTGTGCCTATTTTTTACCTGTAATTGGAGATCCTAATGCGGTTAGAGTTATGATTCCAATTCCCAAGAATTTGGTGGACAAATATCATCACTATATGACGGAGATAGAGTGTTGGGAACAAGATgaataa 1323 0.2389 MSKSIDFPDCYNYKPPITITPSAPTPNHSLYLSNLDDLMYQRLYFSEIYIFKKSVKADILKSSLSRVLVDYYPVAGRLRTSSEDENKLVVDCNGEGVLFAEASMDITAEELLIPCMTQHKSLKKLKCKGNTKKMLDNPLLLIQVTNLRCGGMMLFISFNHVLLDGTGISQFLNDWAHLTKNPNSNLTIKPYHNREMLKIREPPQIKVPHPVYIKKPEHTNPERNYFMWFITQTIVHTSITFGANEILRLRKQCTTSLFKYVTDFEVILAHTWRSMTKSLNMSPTRVVNICFTANIRKKLKLPKGFYGNAFIIVSAESTVKDLVNSNNLDYCIKCVQQAKSYLDDEEYIRSSIDLLKDKTLIVNESTNAFVSQLNKLGIQDLDFGEGKPFHVDTFGINSCAYFLPVIGDPNAVRVMIPIPKNLVDKYHHYMTEIECWEQDE 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02810 440 Pfam Transferase family 18 427 - -
Car04g02810 440 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 432 - -
Car04g02810 440 Gene3D - 231 432 IPR023213 -
Car04g02810 440 Gene3D - 14 214 IPR023213 -
Car04g02810 440 PANTHER BNAC03G58010D PROTEIN 12 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02810 Car-Chr4 54594775 54596894 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02810 12 433 Monolignol Biosynthesis Gene Families AT5G48930 24.717 1.10e-40 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02810 - - cam:101511955 540.421