Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02790 ATGACTGTGGATGAAGTGGAGAGTATCTCTGAGTGGAGCAGGGAGCAAGATAAAGCATTTGAAAATGCCTTGGCAACTTATCCCGAGGATGCTTCAGATCGATGGGAGAAGATTGCGGCTGATGTACCAGGGAAGACTATGGAGGAAATTAAACAGCATTATGAGTTCTTGGTTGATGATGTTAACCAGATTGAAGCTGGTTGTGTGCCTATACCGTCTTATAATTCTTCCTCGGAGGGATCAACGAGTCATGCTAGTGATGAAGGAGTTGGGAAGAAAGGTGGCCTTAATGGTAACAATAATAGTGAGTCTAATCATGGAACTAAGGCTTCAAGATCGGATCAAGAACGACGAAAGGGAATTGCTTGGACTGAGGATGAACACAGGCAAGTTTATCTTTTGCTTATATCTTTTGAAAAAATCATAATGCTAATATTGATTACTTTAATTTCTTAA 456 0.4035 MTVDEVESISEWSREQDKAFENALATYPEDASDRWEKIAADVPGKTMEEIKQHYEFLVDDVNQIEAGCVPIPSYNSSSEGSTSHASDEGVGKKGGLNGNNNSESNHGTKASRSDQERRKGIAWTEDEHRQVYLLLISFEKIIMLILITLIS 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02790 151 MobiDBLite consensus disorder prediction 69 121 - -
Car04g02790 151 CDD SANT 11 54 IPR001005 -
Car04g02790 151 SMART sant 8 60 IPR001005 -
Car04g02790 151 Gene3D - 10 57 - -
Car04g02790 151 SUPERFAMILY Homeodomain-like 11 65 IPR009057 -
Car04g02790 151 MobiDBLite consensus disorder prediction 69 85 - -
Car04g02790 151 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Car04g02790 151 Pfam Myb-like DNA-binding domain 11 54 IPR001005 -
Car04g02790 151 PANTHER TRANSCRIPTION FACTOR DIVARICATA 9 135 - -
Car04g02790 151 PANTHER TRANSCRIPTION FACTOR KUA1 9 135 - -
Car04g02790 151 ProSiteProfiles Myb-like domain profile. 10 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02790 Car-Chr4 53984911 53985366 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car04g02790 Myb_DNA-binding 3.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02790 - - ccaj:109792793 223.787