Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02789 ATGATTGCAGCAGTGTTATTTCTTCTGGGTCTGGACAAGTATGGAAAAGGCGATTGGCGAAGTATATCAAGAAACTTTGTGGTGACTCGAACACCAACACAAGTAGCAAGCCATGCACAAAAATACTTCATTCGGTTGAACTCGATGAATAAAGATAGAAGGCGATCAAGCATACATGATATTACGAGCGTAAACAATGGAGACGTTTCAACACCTCAAGGACCGATGACCGGTCAAACAAACGGTTCCGCCGGAAATTCGGCTGGCAAATCAATCAAACAAGTCCCTACATCCACAACTGGCGTACCAGGTGCAGGAATTTACGCTGCCCCTACCATTGGACAACCTATAGGAGGACCTTTAGTATCTGCTGTTGGCACCCCCGTGAATCTTTCCGGACCTCCACACATGGCGTATGGTATTCGAGCTCCGGTTCCCGGTACCGTTGTACCAGGTGCACCAATGAACATGGTCCCTATGTCATACCCTATGCCCCATACTTCTGCTCCTCACAGGTGA 519 0.4778 MIAAVLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDVSTPQGPMTGQTNGSAGNSAGKSIKQVPTSTTGVPGAGIYAAPTIGQPIGGPLVSAVGTPVNLSGPPHMAYGIRAPVPGTVVPGAPMNMVPMSYPMPHTSAPHR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02789 172 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 47 IPR017930 -
Car04g02789 172 Gene3D - 5 49 - -
Car04g02789 172 MobiDBLite consensus disorder prediction 54 98 - -
Car04g02789 172 MobiDBLite consensus disorder prediction 60 98 - -
Car04g02789 172 SUPERFAMILY Homeodomain-like 6 48 IPR009057 -
Car04g02789 172 Pfam Myb-like DNA-binding domain 7 43 IPR001005 -
Car04g02789 172 PANTHER TRANSCRIPTION FACTOR KUA1 6 167 - -
Car04g02789 172 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 6 45 IPR006447 GO:0003677
Car04g02789 172 CDD SANT 6 43 IPR001005 -
Car04g02789 172 PANTHER TRANSCRIPTION FACTOR SRM1 6 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02789 Car-Chr4 53977760 53978348 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car04g02789 Myb_DNA-binding 6.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02789 - - mtr:MTR_1g033620 314.309