Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02763 ATGATGAAGAGAAAAAACGGAGGAGGAGGATCACTCCAACAAACCCTTCTCCACCGTATCAATTCCTGCAAATCTCGTTTCTCAACCGCCGAAGAAATCGTCAACCATCTCCGTTCAACTTACCCTACTTATCACCGAACCAAGTATCAATCACTCCTTCGATTCGCTCATCAAGCTCTAACTCACAATTCCACTAACAACCTTACTTCTGATTCTGATTCCAAAAAAGAAGATACAATGTTGACAAATACGGATTCTGATTCTGAAGATCCAATGTTGCAGAAGATGGAAGCTACGAGCAATCAGGGTTCGGTCTCTAACGGCGGTGGCGGTGGTGGTGTTGAGGCGAAGGGGGAAATTAAGAAAGAGCCAATGTTTGAGGATTTGGGTGGGATGAAGGAAATTTGGGAGGAATTGGAGATGGAATTGGTGTCATTGAGGTATCCTGAGGTGGGTAGAGAGATGGGAATAGGAATAACATCTGGCATTTTGTTGCATGGACCACCTGGTTGTGGGAAGACTAGACTTGCTCATGCTATTGCTAATGAAACTTCTCTTCCTTTTTATCCTATTTCAGCTACTCAATTAGTTTCTGGAGTCTCAGGTGCATCTGAAGAAAATATTAGAGAGCTTTTCTCTAAAGCAAAAAGGACTGCTCCATCCATTATCTTTATTGATGAGATTGATGCAATTGCTTCAAAACGAGAGAATGTACAGCGTGAAATGGAGAAACGAATTGTGACGCAATTAATGACTTGCATGGATCAAGTTGAGGATTCTGATAAACAACCTACTGGTCATGTTCTTGTAATTGGAGCTACAAATAGGCCTGATGCCCTTGACCCAGCTCTCAGAAGGCCTGGTCGGTTTGAACGTGAGATTCTTATTTCCATTCCTGACGAATCTGCTAGGGAGGAGATCCTTTCTGTGCTTACTCGTAATCTCAAAGTTGATGGTTCATTTGATCTGAAAAAAATAGCCAGGTCTACGCCAGGATTTGTTGGTGCTGATTTGACAGGTCTGACTAAAATGGCTGGTCATATGGCAATGAAGAGGCTAGTTAATGAAAAGAAATGTAAATCATCTCAGCCTGCTAAAGACCGGTGGAAGGAACCTTGGTCACCTGATGAAATAAATAAACTTGCCATCAAAATGTCTGATTTTGAGGAAGCAGCTAAAATAGTGCAACCTTCGTTAAGAAGAGAAGGGTTCTCTTCCATTCCTGAAGTCAAATGGGAAGATGTTGGTGGGCTTGATTTTATAAGACAGAAGTTTAATGAAAATATCATAATGAGTATAAAAAATCCTGAAGATCGTGAGGCATTTGGGTTGGATCTTGATCCAGGATTTTTGCTTTATGGGCCTCCAGGTTGTGGCAAAACACTGATTGCCAAAGCTGTTGCGAATGAGGCAGGAGCAAATTTTATTCATATTAAGGGACCTGAGATTCTAGATAAATTTGTTGGAGCAAGTGAGCATTCAGTTCGGACATTATTTAGTCGGGCAAGGACATGTGCACCTTGTATACTTTTTTTCGATGAGGTGGATGCTTTGACAACAAAGCGTGGTAAAGAAGATGGAAAGGGGGTTATTGCAAGCCTATTAAATCAGTTGCTTCTTGAGTTAGATGGCGCAGATCGGCGTAAAGGTGTTTTTGTGATTGGTGCAACGAATAGGCCTGATGTGATGGACCCTGCTATCTTACGACCAGGTAGGTTTGGTGAACTTCTTTATGTTCCTCTTCCAAGCCCAGACGAACGTGTTTTGATATTGGAAGCTCTTGCGAGGAAGAAGCCCGTCGATGCTAGTGTGGATTTAAATGCCATTGCAAGAATGGAAGCTTGCGAAAACCTTAGTGGCGCTGATCTTGCTGCATTGATGAACAAAGCAGCAACGACTGCTTTCATAGAGAAGGTGAAATCACCCAATAGAACTCTTGATGTATCGATCAAGACAAGCCATTTTGAGATAGCATTAAGGGAAGTCTCTCCCTCTGTATCGGAAAAGCAAAGGGAGCACTATGAGCGTTTGTCACAGAGTCTTAAAGCAGCAGGGCAATGA 2061 0.4236 MMKRKNGGGGSLQQTLLHRINSCKSRFSTAEEIVNHLRSTYPTYHRTKYQSLLRFAHQALTHNSTNNLTSDSDSKKEDTMLTNTDSDSEDPMLQKMEATSNQGSVSNGGGGGGVEAKGEIKKEPMFEDLGGMKEIWEELEMELVSLRYPEVGREMGIGITSGILLHGPPGCGKTRLAHAIANETSLPFYPISATQLVSGVSGASEENIRELFSKAKRTAPSIIFIDEIDAIASKRENVQREMEKRIVTQLMTCMDQVEDSDKQPTGHVLVIGATNRPDALDPALRRPGRFEREILISIPDESAREEILSVLTRNLKVDGSFDLKKIARSTPGFVGADLTGLTKMAGHMAMKRLVNEKKCKSSQPAKDRWKEPWSPDEINKLAIKMSDFEEAAKIVQPSLRREGFSSIPEVKWEDVGGLDFIRQKFNENIIMSIKNPEDREAFGLDLDPGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPEILDKFVGASEHSVRTLFSRARTCAPCILFFDEVDALTTKRGKEDGKGVIASLLNQLLLELDGADRRKGVFVIGATNRPDVMDPAILRPGRFGELLYVPLPSPDERVLILEALARKKPVDASVDLNAIARMEACENLSGADLAALMNKAATTAFIEKVKSPNRTLDVSIKTSHFEIALREVSPSVSEKQREHYERLSQSLKAAGQ 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02763 686 ProSitePatterns AAA-protein family signature. 268 286 IPR003960 GO:0005524|GO:0016887
Car04g02763 686 Gene3D - 115 297 IPR027417 -
Car04g02763 686 Gene3D - 582 660 - -
Car04g02763 686 Pfam AAA+ lid domain 603 656 IPR041569 -
Car04g02763 686 Pfam AAA+ lid domain 321 361 IPR041569 -
Car04g02763 686 CDD AAA 161 297 - -
Car04g02763 686 ProSitePatterns AAA-protein family signature. 551 569 IPR003960 GO:0005524|GO:0016887
Car04g02763 686 MobiDBLite consensus disorder prediction 85 108 - -
Car04g02763 686 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 18 680 - -
Car04g02763 686 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 123 393 IPR027417 -
Car04g02763 686 MobiDBLite consensus disorder prediction 64 118 - -
Car04g02763 686 Pfam ATPase family associated with various cellular activities (AAA) 451 580 IPR003959 GO:0005524|GO:0016887
Car04g02763 686 Pfam ATPase family associated with various cellular activities (AAA) 163 296 IPR003959 GO:0005524|GO:0016887
Car04g02763 686 CDD AAA 448 581 - -
Car04g02763 686 PANTHER AAA-FAMILY ATPASE 18 680 - -
Car04g02763 686 Gene3D - 408 675 IPR027417 -
Car04g02763 686 Gene3D - 299 402 - -
Car04g02763 686 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 408 680 IPR027417 -
Car04g02763 686 SMART AAA_5 446 583 IPR003593 -
Car04g02763 686 SMART AAA_5 159 300 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02763 Car-Chr4 53644924 53649691 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02763 379 677 Calmodulin-binding Proteins AT3G56690 40.924 2.97e-62 223