Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02752 ATGGGTAGTTGTGGAAGGGAAGGTGTAGTGAGACAATATGTAAGATCAAAGGTTCCTCGTTTAAGATGGACACCTGAACTTCATCGTTGCTTTGTTTATGCCATTGAAACTCTTGGTGGTCATCAAAAGGCTACTCCTAAGCTTGTTCTTCAGTTGATGGATGTTAAAGGGCTAACAATTTCACATGTCAAGAGCCATTTGCAGATGTACAGGAGCATGAGAAGTGACTTGTGTAAACAAGATAGGACATCATCCGTACATAAAAGACAATCTTTTCAGGAGCATGATGAAGTGAATGATGTTGGTGTTCTCTCCTTCTTAGAATCTATTGGAAAGGAATCTGATTCTCTCTTCACCTGCAGAAATTTCTCCCCTAAAAGAGCAAGAATCGAGAAGACAAGTAATTTCCTCACAGGAATCCTACAATGCAGCCAAAGAATATGTGAAGCAGATCCAAATCCATACACAACTTTTTATGATTATGTGCAGGACATGGTTGAGCAGCAGCAGAAAGGAATAAAGGAGATTTGTGTTGGTTCAATATGGCAGACTCAACCACAATATTGCAATATATTTCCTATGCTACCAAAACAAGACACTCATTTGTTCCAGGTTACCAAGTTAAAGGAAAAAAAGCATGTGAATGAAATTGGCAAGACTAAAAGTGTACGTGCAGAAGATGAAGAAATAGGAGATTGTGAGTTGTCATTATCTATTTCATTGCCCCATCTTTCCCCTCAAAGAAGTAATGTTTCTTCAGCCAATGATATCAAAGACTCTGGATTTAGAAACTATATGGGTTGTTCCACTGTCCAAAACAGAATTAATTTGGACCTATCTTTGGCCATTTGA 852 0.3838 MGSCGREGVVRQYVRSKVPRLRWTPELHRCFVYAIETLGGHQKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRSDLCKQDRTSSVHKRQSFQEHDEVNDVGVLSFLESIGKESDSLFTCRNFSPKRARIEKTSNFLTGILQCSQRICEADPNPYTTFYDYVQDMVEQQQKGIKEICVGSIWQTQPQYCNIFPMLPKQDTHLFQVTKLKEKKHVNEIGKTKSVRAEDEEIGDCELSLSISLPHLSPQRSNVSSANDIKDSGFRNYMGCSTVQNRINLDLSLAI 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02752 283 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Car04g02752 283 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 283 - -
Car04g02752 283 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Car04g02752 283 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Car04g02752 283 Gene3D - 18 75 - -
Car04g02752 283 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 283 IPR044848 GO:0003700
Car04g02752 283 SUPERFAMILY Homeodomain-like 17 74 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02752 Car-Chr4 53426018 53431825 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02752 1 74 G2-like Transcription Factor Family AT1G14600 73.418 5.96e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car04g02752 Myb_DNA-binding 1.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02752 - - gmx:100796564 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02752 04 53426018 53431825 Car04g02752 04 53426018 53431825 ECH