Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02746 ATGTCAAATCCAATATTTCTCAAGACTCCAGATGGCAAAAAATGGAAAATATATTTGACAAAGAAAGATGGTGATATTTGGATTCACAAAGGTTGGAAGGAATTTGCTATACATTATTCACTAGATCATGGTCACATGATGTTCTTTCAATTTGATGTGCACATATTTGACAAAAGTACCCTTGAAATTGAATATAATATTCATGGTATTCATTATGAGCACAACAATTCAATTGAAAATTTGGATGGTCAACCTCCATGCAAGAAATTTAGAAAAGAAACAAATGAAGATGCTGGAACAAGTTCCAAATTGCAAAACATGCCTAAACAAATCCAAGTTAAAGGTATAAATTCATGA 357 0.3109 MSNPIFLKTPDGKKWKIYLTKKDGDIWIHKGWKEFAIHYSLDHGHMMFFQFDVHIFDKSTLEIEYNIHGIHYEHNNSIENLDGQPPCKKFRKETNEDAGTSSKLQNMPKQIQVKGINS 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02746 118 MobiDBLite consensus disorder prediction 99 118 - -
Car04g02746 118 Pfam B3 DNA binding domain 5 52 IPR003340 GO:0003677
Car04g02746 118 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 1 103 - -
Car04g02746 118 SUPERFAMILY DNA-binding pseudobarrel domain 3 59 IPR015300 -
Car04g02746 118 MobiDBLite consensus disorder prediction 91 118 - -
Car04g02746 118 ProSiteProfiles B3 DNA-binding domain profile. 1 69 IPR003340 GO:0003677
Car04g02746 118 Gene3D - 1 60 IPR015300 -
Car04g02746 118 CDD B3_DNA 2 57 IPR003340 GO:0003677
Car04g02746 118 PANTHER B3 DOMAIN-CONTAINING 1 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02746 Car-Chr4 53242471 53242827 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02746 1 84 B3 DNA Binding Superfamily AT3G18990 32.292 4.94e-12 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Car04g02746 B3 1.2e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02746 - - cam:101507403 249.595