Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02745 ATGAGTTGCAACCAGCAAACTAAGCATTCTCACCCTTCTATTATTCGTTTCTTTAAAGTTATAACTTCAACAACTCTTCAAGATGGAAAGCTTCATGGAAGAATCCGGAGAATTCCAAACAGTTTTACAAAGAAACATGGCAATGATACATCAAATCCAATATTTCTCAAGACTCCAGATGGCAAAAAATGGAAAATATATTTGACAAAAAAAGATGGTGATATTTGGTTTCACAAAGGTTGGATGGAATTTGCTAAACATTATTCACTTGATCATGGTCACATGATGTTCTTTCAATGTGAAGAAAAAGAAACCTCTCAATTTGATGTTCACATATTTGACAAAAGTACCCTTGAAATTGAATATAATGTTCATGGTACTCAACATAACCTTGAACAAAATAGTGACAACAACGTTGAAATTTGGGATAAGCCACCTAATTCATTCGAGAAGTCTAGACTAAAATCACCAATTCTACCATGTTCTCAACCACATAAGAAATTGAAAACTGAAACAAGGGAAGGTGTTGGAACAAGCTCCAATTTACAAACTTTGCCTATGCCTCATGTCCAAGCTAGTGAGGATATGGATGGTGGCACTGAATGCCTAAAAATGGAGCACGAGCAAGAACAATTAATTTATAAAATGAATGAAGCATTAAATAGAGCTAGAAGCTTCAAATCTAAAAATCCTTCTTTCATTATGGTCATCAAACCTTCATATCTTTATTACTATTCCTTGTATGTCCCATCACAATTTTCAATAAATTATTTGAAGAAAAAGCAAAGTGATATTCTCCTTCAACTCTTGGATGGGAGGACTTGGCATGCTAGATACTCTTATGGAAAAATTAAAGTTGGATGGAGGAAATTTGTAGAAGATAATAAGTTGGAAAATGGGGATGTGTGTCTTTTTGAGTTGACCAAAAGCCAAGCCCTTACTTTGAAAGTACTTATCTTTCGAGATGAAGAACAACCACATTCTTCTCCACCCAAAGAATCATTTCTTGAAGACAAACACATATATGGATAA 1032 0.3411 MSCNQQTKHSHPSIIRFFKVITSTTLQDGKLHGRIRRIPNSFTKKHGNDTSNPIFLKTPDGKKWKIYLTKKDGDIWFHKGWMEFAKHYSLDHGHMMFFQCEEKETSQFDVHIFDKSTLEIEYNVHGTQHNLEQNSDNNVEIWDKPPNSFEKSRLKSPILPCSQPHKKLKTETREGVGTSSNLQTLPMPHVQASEDMDGGTECLKMEHEQEQLIYKMNEALNRARSFKSKNPSFIMVIKPSYLYYYSLYVPSQFSINYLKKKQSDILLQLLDGRTWHARYSYGKIKVGWRKFVEDNKLENGDVCLFELTKSQALTLKVLIFRDEEQPHSSPPKESFLEDKHIYG 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02745 343 SUPERFAMILY DNA-binding pseudobarrel domain 226 321 IPR015300 -
Car04g02745 343 CDD B3_DNA 231 321 IPR003340 GO:0003677
Car04g02745 343 Gene3D - 11 117 IPR015300 -
Car04g02745 343 ProSiteProfiles B3 DNA-binding domain profile. 232 323 IPR003340 GO:0003677
Car04g02745 343 Pfam B3 DNA binding domain 30 115 IPR003340 GO:0003677
Car04g02745 343 Pfam B3 DNA binding domain 236 321 IPR003340 GO:0003677
Car04g02745 343 PANTHER B3 DOMAIN-CONTAINING 6 322 - -
Car04g02745 343 SMART B3_2 17 116 IPR003340 GO:0003677
Car04g02745 343 SMART B3_2 233 323 IPR003340 GO:0003677
Car04g02745 343 ProSiteProfiles B3 DNA-binding domain profile. 21 116 IPR003340 GO:0003677
Car04g02745 343 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 6 322 - -
Car04g02745 343 MobiDBLite consensus disorder prediction 160 184 - -
Car04g02745 343 Gene3D - 214 325 IPR015300 -
Car04g02745 343 CDD B3_DNA 16 114 IPR003340 GO:0003677
Car04g02745 343 SUPERFAMILY DNA-binding pseudobarrel domain 10 116 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02745 Car-Chr4 53233668 53235948 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02745 17 321 B3 DNA Binding Superfamily AT3G18990 30.409 4.81e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Car04g02745 B3 3.7e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02745 - - cam:101507403 666.766