Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02743 ATGTCCCTTCAGATCAATGTTGATCGTAAGTCCAGTTTTTTCAAAGTCATTGTCGAGACAACTCTTCAAACAAACGAGCTGATGCTTCCAAGGAGTTTTGTGAAGAAATATGAGAAAGAATTATCAAACCCAGTAACTCTCATTTTACCAAATGATGATAAATGGGAAATAAATTGGATAAAACGTGACAATGATGTGTGGTTTCAAAATGGTTGGGAAAAATTTGCACAACACTATTCAATGAGTCATGGACATTTTTTAGTTTTTAAATTTGATAGAGGGTCTAAATTTCAAGTTATGATATTTGATAAGAGTGCTTTGGAAATAGATTATTGGAGTATAACAACAAGCTCTAGAAATGATGGTGAAAGGAACAACCAAAATCATGAAGATGTTGAAAAGTGTGAAAATGATAATAATTATACTGAGATTTCTGTTGAGAGTGAAAGGCCAAGATTTCTATCACCTCAACCTCACAAAAGAATGAAAACAAATTATGGAATTAATAGGGAAAGTTCGTTGAAAGGTAAGAATTATTCGAATGATATTGAAGATAATAAAAGAAGGATTGTAGCACTAGAAGAGACTCAAAGGACAGCCATGAATTTTCGTTTTGATAATCCCTCTTTCATTCGACCATTGCATCCATCGTACCTCGAAAATGTGATTAATCTACCTAGCTCTAAGCACTTTCAAGATTATGAAAGTCCTACGTTGAAGAAGAGATGA 729 0.332 MSLQINVDRKSSFFKVIVETTLQTNELMLPRSFVKKYEKELSNPVTLILPNDDKWEINWIKRDNDVWFQNGWEKFAQHYSMSHGHFLVFKFDRGSKFQVMIFDKSALEIDYWSITTSSRNDGERNNQNHEDVEKCENDNNYTEISVESERPRFLSPQPHKRMKTNYGINRESSLKGKNYSNDIEDNKRRIVALEETQRTAMNFRFDNPSFIRPLHPSYLENVINLPSSKHFQDYESPTLKKR 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02743 242 CDD B3_DNA 12 103 IPR003340 GO:0003677
Car04g02743 242 Gene3D - 5 106 IPR015300 -
Car04g02743 242 ProSiteProfiles B3 DNA-binding domain profile. 12 105 IPR003340 GO:0003677
Car04g02743 242 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 10 228 - -
Car04g02743 242 SUPERFAMILY DNA-binding pseudobarrel domain 10 105 IPR015300 -
Car04g02743 242 SMART B3_2 13 105 IPR003340 GO:0003677
Car04g02743 242 Pfam B3 DNA binding domain 13 104 IPR003340 GO:0003677
Car04g02743 242 PANTHER B3 DOMAIN-CONTAINING 10 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02743 Car-Chr4 53197807 53200403 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02743 13 228 B3 DNA Binding Superfamily AT3G18990 29.344 2.71e-22 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Car04g02743 B3 2.4e-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02743 - - cam:101507713 463.766