Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02728 ATGGCTGGATTGGTTCCACTTCCTTCAAACCTACTACCATCTGATGGAAGTCCAGAATGGATGAGCAAAGCAGACAATGCATGGCAACTAACAGCGGCAACATTCGTCGGTCTACAAAGCGTACCGGGATTGATAATCTTATACGGTGGTGCTGTCAAAAAGAAATGGGCAGTTAATTCAGCATTCATGTCACTATATGCATTTGCTTGTGTTTTTTTCTGTTGGGTTGTTTGGGGTTATAGAATGTCTTTTGGTGACCAACTTTTCCCTTTTTTAGGGAAACCAGCTGTTTCTCTTGATGAAGTCTACCTTTTCAAACAAGCTTTTTTAGGGGCTTTTCCTAATGCTACTATGGTTTATTTCCAGTGTGTTTTTGCTGCTATTACTTTGATTTTGATAGCTGGTGCTTTGTTGGGGAGAATGAATTTTTATGCTTGGATGCTGTTTGTTCCTTTGTGGTTAACTTTTTCTTATACTTTTACTGCTTTTAGTATTTGGAGTACTAATGGCTTTTTAACTAAGTTGGGGATTATTGATTATTCTGGTGGTTATGTTATTCATTTGTCTTCTGGAGTTGCTGGTTTTACAGCTGCTTATTGGGTAACAGGGCTGTTATGGATGGGATGGACAGGTTTCAATGGAGGAGATCCTTACTCGGCCGGCATAGACGCTTCTTTGGCTGTCTTAAACACACATGCATGCACTGCTACTAGCTTGCTTACTTGGGTTTTTCTTGATGTCATTTTCTTCAAAAAGCCTTCTGTAATTGGTGCTGTTCAAGGCATGATTACTGGTTTGGTTTGCATTACTCCTGCTGCAGGAGTTGTGCAAGGATGGGCAGCACTTATAATGGGAGTATTCTCTGGCTCAATTCCATGGTTCACAATGATGGTAATTCACAAAAGATCAAAGTTACTACAAAAAGTAGATGACACAATGGCAGTATTACACACTCATGCAATTGCTGGAAGCCTTGGAGGAATTCTCACTGGTCTATTTGCTGAGCCAAAATTGAACAAATTGTTCTATGGAAATTATAATAAATATGTTGGTTTATTTTATGGAATAAAAATGAACATGTTACACTTAGGAGTCAGACAAATAGGAATCCAACTCCTTGGAATTTTGTTTGTTATTTTTGTTAATGTCATAAGCACGAGTTTGATATGTCTCTTTATTCGAATTTTTGTTCCGTTGAGAATGTCGGAAGAGGATATGGAAATTGGTGATGAGGCTGCTCATGGTGAAGAAGCTTATGCAATTTGGGGTCAAGGTGATAAACATGAAAATTCAAGTTCAAAATATGGTGGAAGTTCTTTGTATGAAGATGTTGAAGTTGCAGCCACTAAGAATAAACGTGGTAGTCAAATTGAGATGATGTAA 1383 0.3825 MAGLVPLPSNLLPSDGSPEWMSKADNAWQLTAATFVGLQSVPGLIILYGGAVKKKWAVNSAFMSLYAFACVFFCWVVWGYRMSFGDQLFPFLGKPAVSLDEVYLFKQAFLGAFPNATMVYFQCVFAAITLILIAGALLGRMNFYAWMLFVPLWLTFSYTFTAFSIWSTNGFLTKLGIIDYSGGYVIHLSSGVAGFTAAYWVTGLLWMGWTGFNGGDPYSAGIDASLAVLNTHACTATSLLTWVFLDVIFFKKPSVIGAVQGMITGLVCITPAAGVVQGWAALIMGVFSGSIPWFTMMVIHKRSKLLQKVDDTMAVLHTHAIAGSLGGILTGLFAEPKLNKLFYGNYNKYVGLFYGIKMNMLHLGVRQIGIQLLGILFVIFVNVISTSLICLFIRIFVPLRMSEEDMEIGDEAAHGEEAYAIWGQGDKHENSSSKYGGSSLYEDVEVAATKNKRGSQIEMM 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02728 460 Gene3D Ammonium transporter AmtB like domains 203 423 IPR029020 -
Car04g02728 460 PANTHER AMMONIUM TRANSPORTER 202 460 - -
Car04g02728 460 PANTHER AMMONIUM TRANSPORTER 2 201 - -
Car04g02728 460 PANTHER AMMONIUM TRANSPORTER MEP2 202 460 IPR001905 GO:0008519|GO:0016020|GO:0072488
Car04g02728 460 SUPERFAMILY Ammonium transporter 20 401 - -
Car04g02728 460 Gene3D Ammonium transporter AmtB like domains 13 202 IPR029020 -
Car04g02728 460 PANTHER AMMONIUM TRANSPORTER MEP2 2 201 IPR001905 GO:0008519|GO:0016020|GO:0072488
Car04g02728 460 Pfam Ammonium Transporter Family 27 200 IPR024041 GO:0008519|GO:0016020|GO:0072488
Car04g02728 460 Pfam Ammonium Transporter Family 202 419 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02728 Car-Chr4 52938704 52940377 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02728 116 456 Inorganic Solute Cotransporters AT2G38290 55.923 2.17e-127 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02728 K03320 - gmx:100787856 797.734