Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02726 ATGAGTTCTAAAAATTCTAAAGAAAATGATCTTCCTATTGTTGAGGTAGAAAAAGTTGATGATGCTTATCTCTCTGCCTTGTTATTATGTTTTAGTCGTGTATTGCCTGCAGTACTAAATGCTGCTGTTGATCTCAATTTATTCAATATTATAGCTAAGTTACAAAGTTCAAGTCATCATTCTACTTTTTCTGCTTTTGAAATTGCTTCTCAACTTCCAAATCAATACGATGAATTGGTTGAAAGACTTGAACGCATGTTATATGTGTTGACAAGTTATTCTCTTTTCAATTGTTCCATTCGTATTAATGGAGAAGGTAAGAGTGAAAGAGTTTATGCTCTCTCACCAATTGGTCAATACTTTGCATTTGATCAAGATGGAGGCTCTTTGGATCCACTCTCAACATTAGTACATAGAGGATGTGACAGTGTTTGGGGTGATGTAAAGGATGCAATTTTGGATCCTAATATAAAAAATCTATTCCAAAGCATCAATGGAGTGTCGTTTTATGAATATACAAAGACAGATAAAGAGCTGAATAGTATTGTTAACAAAGCAATGGCCCATGCTGGACCATTAGAAATTAAAAGGGTCCTACAATTATATAAGGGATTTGAGGGAATCTCAACATTGGTTGATGTTGGAGGTGGAGTGGGAGGGTCCTTAAAACTCATCATCTCTCAATATCCTTCAATCAAAGGAATTAATTTTGATTTGCCACAAGTAGTTCAAGATGTACCTCCTCATCCAGGGATTGAGCATGTTGAAGGTAGCATGTTTGAAAGTGTTCCAACAGGTGATGCCATCTTACTAAAGCTTGTATGTCACAATTGGTCAGATGAAGAATGTGTGAAGTTTTTACGAAATTGCCACAAAGCTTTACCAAAACATGGGAAGGTGATTGTTTTGGACTATGTAATTCCAGAAGTCCCTAATTCAAGTAAAATATCTAAGCATACTTGTGTTGTTGACAACCTCATGTTTTTAGTAACAACTGGAAAAGAAAGAAGTGAGGAAGAATTCAAGAGTTTATGTAAGAGATCTGGATTTTCCAAATTTCATGTTGCTTGCAATGATGATGTATCAGCAATAATTGGGGTGATGGAATTTTATAAATAG 1119 0.3503 MSSKNSKENDLPIVEVEKVDDAYLSALLLCFSRVLPAVLNAAVDLNLFNIIAKLQSSSHHSTFSAFEIASQLPNQYDELVERLERMLYVLTSYSLFNCSIRINGEGKSERVYALSPIGQYFAFDQDGGSLDPLSTLVHRGCDSVWGDVKDAILDPNIKNLFQSINGVSFYEYTKTDKELNSIVNKAMAHAGPLEIKRVLQLYKGFEGISTLVDVGGGVGGSLKLIISQYPSIKGINFDLPQVVQDVPPHPGIEHVEGSMFESVPTGDAILLKLVCHNWSDEECVKFLRNCHKALPKHGKVIVLDYVIPEVPNSSKISKHTCVVDNLMFLVTTGKERSEEEFKSLCKRSGFSKFHVACNDDVSAIIGVMEFYK 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02726 372 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 27 372 IPR016461 GO:0008168
Car04g02726 372 PANTHER O-METHYLTRANSFERASE 4 372 IPR016461 GO:0008168
Car04g02726 372 PIRSF O-mtase 3 372 IPR016461 GO:0008168
Car04g02726 372 Pfam O-methyltransferase domain 145 351 IPR001077 GO:0008171
Car04g02726 372 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 4 372 - -
Car04g02726 372 SUPERFAMILY "Winged helix" DNA-binding domain 19 125 IPR036390 -
Car04g02726 372 Gene3D Vaccinia Virus protein VP39 180 358 IPR029063 -
Car04g02726 372 CDD AdoMet_MTases 249 307 - -
Car04g02726 372 Pfam Dimerisation domain 38 91 IPR012967 GO:0046983
Car04g02726 372 Gene3D - 34 198 IPR036388 -
Car04g02726 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 144 360 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02726 Car-Chr4 52777742 52843204 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02726 5 358 Monolignol Biosynthesis Gene Families AT5G54160 45.556 1.27e-103 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02726 - - gmx:100793053 491.115