Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02725 ATGAGTTCCAACTCCAAACAAACTCAACTTCCCGCAGAGGTACCAAAGGCCGACGATGCTTATCTCTCTGCTCTGGTATTATGTTTTAGTCGGATTTTTCCCGCAATACTAAATGCTGCTGTTGATCTCAATTTGTTTGATATCATAGCTAAAACACAAAGTTCACATGGTTCAAGCTTATATGCATCTGAAATTGCTTCTCAGCTTCCTAATCAACACCCTGAATTGACTGATAGGCTCGAGCGCATGTTGCCTGTGTTGGCCAGTTACTCTCTTCTTAATTGCTCCATTCGTATTAATGGAGAGGGTAAGAGAGAAAGAGTTTATGCTCTTACACCAATTGGTCAATACTTTGCCCTTGATAAAGATGGAGGCTCTTTGGGTCCACTCTCAACATTAGTACATAGAGGATGTAACAGTGTTTGGGGTGATGTAAAGGATGCAATTTTGGATCCTAATATCGAAAATATTTTCCAAAGCCTTAATGGGAGGTCGTTTTATGAATATACGAAGATGGATAAAGAGTTGAATAATATTGTTAATAAGGCAATGGCCCATGCTGGACCATTAGAAATTAAAAGGGTCCTACAATTATATAAGGGATTTGAGGGAATCTCAACATTGGTTGACGTTGGAGGTGGAGTGGGAGGGACCTTAAAACTCATCATCTCTCAATATCCTTCAATCAAAGGAATTAACTTTGATTTGCCTCAAGTTGTTCAAGATTTACCTCCTCATCCAGGTATAGTGCATGTTGGAGGAGATATGTTTGAAAGTGTTCCAACTGGTGATGCCATTTTATTAAAGCTCGTATGCCACAATTGGTCAGATGAAGAATGTGTGAAGTTTTTAAGTAATTGCTACAAAGCTTTACCAAAACATGGGAAGGTGATTGTTTTGGACTATATAAATCCAGAACTCCCTGATTCAAGTAAAATATCTAAGCATACTTGTGTTATTGACAACCTTATGTTTTTAGTAACAACTGGAAAGGAAAGAAGTGAAGAAGAATTCAAGAGTTTATGCAAGAAATCTGGATTTTCCAAATTTCACGTTGCTTGCGGTGATGATGTATCAGCAATGTCAGGGGTGATGGAATTTTATAAATAG 1110 0.3802 MSSNSKQTQLPAEVPKADDAYLSALVLCFSRIFPAILNAAVDLNLFDIIAKTQSSHGSSLYASEIASQLPNQHPELTDRLERMLPVLASYSLLNCSIRINGEGKRERVYALTPIGQYFALDKDGGSLGPLSTLVHRGCNSVWGDVKDAILDPNIENIFQSLNGRSFYEYTKMDKELNNIVNKAMAHAGPLEIKRVLQLYKGFEGISTLVDVGGGVGGTLKLIISQYPSIKGINFDLPQVVQDLPPHPGIVHVGGDMFESVPTGDAILLKLVCHNWSDEECVKFLSNCYKALPKHGKVIVLDYINPELPDSSKISKHTCVIDNLMFLVTTGKERSEEEFKSLCKKSGFSKFHVACGDDVSAMSGVMEFYK 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02725 369 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 369 - -
Car04g02725 369 PIRSF O-mtase 1 369 IPR016461 GO:0008168
Car04g02725 369 CDD AdoMet_MTases 238 303 - -
Car04g02725 369 Gene3D Vaccinia Virus protein VP39 177 354 IPR029063 -
Car04g02725 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 369 IPR016461 GO:0008168
Car04g02725 369 Pfam O-methyltransferase domain 142 348 IPR001077 GO:0008171
Car04g02725 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 139 355 IPR029063 -
Car04g02725 369 SUPERFAMILY "Winged helix" DNA-binding domain 18 121 IPR036390 -
Car04g02725 369 Gene3D - 32 195 IPR036388 -
Car04g02725 369 Pfam Dimerisation domain 36 88 IPR012967 GO:0046983
Car04g02725 369 PANTHER O-METHYLTRANSFERASE 1 369 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02725 Car-Chr4 52741421 52745284 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02725 1 354 Monolignol Biosynthesis Gene Families AT5G54160 45.938 5.84e-106 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02725 - - aprc:113869089 522.316