Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02722 ATGGATGGTGACAAATCTCCCTATTTGGATGAAGACATGTTTCTCGTAGACAATATGGAGCAAACCAATTTCTTTCTTGAGAGTGCTAATTCCAACATTAATATTGATAATGTTTGTGTTACCACAATTCAAGAGAACATGCTCAACAATAGTAATACTTCCAACTCCCTCATTTCTCAAGAATATAACTATGCTTCTAATTCACAACAAGAACCTTCTCAATACATTTTATCTTTTGAAAAGTCAATTGTTGAACTTTCACCTAATAGTGCCATTGCCACATGTTCTTCTATTATGGGCCAAAAAACAACTTTGAATAACAATGTGAGTGAATTACCAAAGGCAAAGGAAAGAACCAAGAGTTTTAGAAGCTCATCTGAGACACAAGATCACATCTTGGCTGAGAGAAAAAGGAGACAAGTTATTACTGAGAGGTTCATAGCACTATCTGCCATCATTCCGGGATTGAAGAGAACTGACAAGGCCTACATACTTCGAGAAGCCATCAATTATGTGAAACAACTTCAAGAAAAAGTAAAAGATTTGGAGAATCCTAACAAAATGAAAAAAGGAGATTCATTAATATTCATAAAAAATTCCCAAGCTTCCACAACAGAGGAAACCACTTCATGTGAAGAGAAAATTGATAATAGTAAGAAAGAACTACCAAAGGTTGAAGCAAGAGTCATAGAGAAGGAAATTCTAATTGAAATCCATTGTGAGAAACAAAAGGATATTGTGGTCAGATTAATGGTCTTGCTTCAAAATCTTCATCTATCACTTGCTTGTAGTAGTGTATTGCCATTTGGAAATTCCATTCTAAAAGTTACAATAATTGCTCAGCTATGA 849 0.3439 MDGDKSPYLDEDMFLVDNMEQTNFFLESANSNINIDNVCVTTIQENMLNNSNTSNSLISQEYNYASNSQQEPSQYILSFEKSIVELSPNSAIATCSSIMGQKTTLNNNVSELPKAKERTKSFRSSSETQDHILAERKRRQVITERFIALSAIIPGLKRTDKAYILREAINYVKQLQEKVKDLENPNKMKKGDSLIFIKNSQASTTEETTSCEEKIDNSKKELPKVEARVIEKEILIEIHCEKQKDIVVRLMVLLQNLHLSLACSSVLPFGNSILKVTIIAQL 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02722 282 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 4 282 - -
Car04g02722 282 Pfam Helix-loop-helix DNA-binding domain 130 176 IPR011598 GO:0046983
Car04g02722 282 SMART finulus 132 181 IPR011598 GO:0046983
Car04g02722 282 Gene3D - 124 194 IPR036638 GO:0046983
Car04g02722 282 PANTHER BHLH TRANSCRIPTION FACTOR 4 282 - -
Car04g02722 282 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 126 175 IPR011598 GO:0046983
Car04g02722 282 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 129 189 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02722 Car-Chr4 52640995 52647456 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02722 114 281 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 41.618 1.55e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car04g02722 HLH 1.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02722 - - mtr:MTR_8g009020 342.043