Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02717 ATGGCTGCTCAACTCAATTATTTTGTTGGATCTCATGTTTGGGTTGAGGACCATGATGATGCCTGGATAGCTGGAGAAATCCTTGAATCTAATGATCATGAGCTCACCATTAGCTTTGAATCAGGAACAAGGGTTGTGAGTAAAACAGCTAATATCTATCCCAAAGATCCTGAATTTCCACCAAATGGTGTGGATGATATGACAAGACTTGCATATCTGCATGAACCGGGAGTACTTCAAAATTTGCAAAGTCGTTATACCATCAATGAAATATATACATACACAGGAAACATATTGATAGCAGTGAACCCTTTTCAAAGGTTACCTCATTTGTATGCAAATGAAACAATGGCAAAGTATAAAGGTGCGGCTTTTGGTGAGCAGAGTCCACATCCTTTTGCAATTGCAGGTTATGCATATAGGAAGATGATAAATGAAGAAAGAAGCCAAGCTATTCTGGTTAGTGGAGAAAGTGGAGCTGGTAAAACAGAAAGTACAAAGATGCTTATGCACTATCTTGCCTATTTGGGAGGGAGAGCAGCAACTGAGGGAAGGTCTGTGGAGCAACAAGTGCTAGAGTCCAATCCTGTTTTAGAAGCATTTGGGAATGCAAAGACTGTTAGGAATAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAGTTCGATCAAAAGGGGAGAATTTCAGGAGCTGCTATCAGAACATATTTGCTGGAACGATCACGTGTTTGTCAAGTTTCTGATCCAGAGAGAAATTATCATTGCTTTTATATGCTTTGTGCTGCACCACAAGAGGATATTGATAGGTTCAAATTGGGAAATCCAAGAAGCTTTCATTATCTTAATCAATCTAACTGCATTGAATTGGATGGATTGGATGATTCTAAAGAGTACCTTGCAACAAGAAGAGCCATGGATGTTGTTGGAATCAACTCTGATGAACAGGATGCTATATTTCGAATAGTTGCTGCTGTACTTCATCTAGGAAACATTGAATTTGTTAAGGCAGTTGATGAAGGAACGGATTCCTCTAAACCTAAAGATGAACGATCGTATTTCCATCTCAAAACTGCAGCTGAACTTTTGATGTGTGATGAAAAGTCCCTTGAAGACTCTTTTTGCAAACGTGTTATGGTGACTCGTGGTGATACTATAACGAAATGTCTCGATCCAAATTCTGCAGCTCTCAGCAGAGATGCATTGGCAAAAATTGTTTATTCAAGGCTTTTTGATTGGATTGTGGACAAGATTAATAACTCAATTGGTCAAGATCCAACTTCAAAGAACTTAATTGGAGTTCTAGATATTTATGGATTTGAGAGTTTCAAGACAAACAGCTTTGAGCAATTTTGCATAAATTTGACAAATGAGAAGTTACAGCAACATTTCAACCAGCATGTCTTTAAAATGGAGCAAGAGGAATATACAAAGGAAGAAATTGATTGGAGTTATATAGAGTTTGTTGATAATCAAGATGTTCTTGATCTTATTGAGAAGAAACCCGGTGGTGTTATTGCTCTTCTGGATGAGGCCTGTATGTTTCCAAGATCAACGCATGAAACATTTGCCGAAAAGCTATATCAAACGCTTAAGGACAATAAGAGGTTCAGCAAGCCGAAGTTATCGCGAACTGGCTTCACAATCAATCACTATGCTGGTGATGTCACATATCAAACTGATCTTTTCCTTGATAAAAACAAAGATTATGTTGTTCCGGAGCACGCTGCGCTGCTTTGTGCTTCCAAGTGCTCCTTTGTTTCAGGACTTTTCCCACCTTTACCTGAGGAAACTACTAAATCAACAAAGTTCTCTTCTATTGCCGCTCAGTTTAAGCAACAACTTCAATCTTTGCTTGAAACACTGAATGCCACGGAGCCACACTACATTCGTTGCGTAAAGCCAAATAATCTTCTTAAGCCAGGGATATTCGAGAACAACGATGTGTTGCAGCAGCTTCGATGTGGGGGAGTTATGGAGGCAATTAGGATAAGTTGTGCTGGATTTCCAACTAGAAAGAACTTTGATGAATTCGTTCAACGGTTTAGTATATTGGAACCTAAGGTTCTAACATCATGCCCTGATGAGATGACAGCTTGCAAGAGGCTTCTAGATAAATCAAACCTTAAAAATTATCAGATTGGAAAAACAAAAGTGTTTCTGAGAGCTGGTCAAATGGCAGAACTAGATGCATGCCGTGCCGAGGTTCTAGGAAAATCTGCAATCGTTATTCAGAAAAAAGGTCGCACATTTATTTGTGAGAAACGCTACAAGTTATTGCGGTTCTCTGCCACAGAACTACAAAGGGCTATTAGAGGACAACTTGCAAGGCATCGGTATGAATGCATGAGAAGGGATGCTGCATCTTTGATAATCCAGAAACAATTCCGCATGTATCTTTCAAAAAGTGCTTATAAAACTACGTATGCCAAAGCTGTTTGTGTTCAAGCTGGCATGAGAGGGATGGCTGCTAGAAATGAACTTAGATTCCGGAAGCGGACACAAGCCGCAACTGTTATTCAGGGTCACTACAGATGTTATTTAGCTTATTCATATTTCCAAAGTTTGAAGAAAGCAACAATCTCTGTACAGTGTTCCTGGAGGAGAACAAGTGCACGTCGAGAACTTCGAAAACTTAAAATGGCTGCTAAGGAATCCAAGGCCCTAGAAGCTGCAAAGGTCGTCCTGGAAAAGCAAGTTGAGGAACTAACTTTGTGTCTAGAAAAAGAGAAGAGAATGAGGGAAGCCAAGACACAGGAAAATGAAAAATTACAATGTGCTTTGGAAGAGATGGAGCTTAAGTTCGAAGAAACTAAGGCAAAACTCATTGAGGAACGTGACGCTGCCATGAAAGTAGCTGAGCAATCTCCAACAATACAGGAAAATCATGTTGTTGACAATGAATTGGTCAATAAGCTTACTGCAGAAAATGAAAAACTCAAGGAGCTTGTACATTCACTGAAAAAGAAAGCTAAAGAGGAGCTTCATGAGATTGTTACTGACAATGAACAGATTTATAAGCTTTGTGAAGAAAATGAACAACTCAAGGAGATGGTTGATTCATTGGAAAAGAAAACTGAACAGGAGTTTCCTGCTAATTTTACTGACAATGAAGTGATTAATAAACTTACTGAAGAAAAAGAACATTTTAAGGGTCTGGTTAATTCATTGGAAAAGAAAATTGATGAGACAGAAAAGAAGTATGAAGAAAGTAGCAAGATTAGCGAGGAGCGAATGAATCAAATTATAGAGACAGAATCAAAGATAATTGAGCTAAAGACATATATGCAAAGGCTTGAAGAAAAACTTTCTGATATGGAATCTGAGAATCAAATTTTTCGGCAGCAAGCGCTGTTGAGTTCTTCGTCCAAGAGAATGTCAGAAAAGTCCTCACCTCCTGTAATTCCGCCTTTGGAAAATGGTCATCAGGTACCAGTGATCTCTACAACAGTAAAAACACTTGGTTCAGAATCTGTGAGGAGATCTCACCTGGAGAGACATCAAGAAAGTGTAGATACACTTTTCAAATGTGTGACAAAAGATCTTGGATTCTCTGAAGGGAAACCTGTTGCAGCATTTACACTTTATAATTGTTTGCTACATTGGAAATCTTTTGAAGCAGATAAAACAAGTATATTTGATCGTCTTATTCAGATAATCGGTTCTGCCATAGAGGATCAAGATAATAACAATTGTATGGCTTATTGGTTGTCCAATACATCTGCTTTGTTTTTCCACCTTCAGCGATGTCTAAGAGTACCAGCACGAAAACCACCGACTCCAACATCATTTTTTGGGAGGATGACCCAGGGTTTCCGCTCATCCAATAGTCTTTCAAGTAGTGCATTTGATGTAATAAATCAAGTTGATGCAAAGTATCCAGCTTTGCTCTTCAAGCAACAGCTTGCAGCTTATGTGGAAAAGATATATGGAATCGTTCGAGAAAATATGAAGAAAGATTTGTCTCCTCTGCTTTCTTCTTGCATTCAGGAGCACAGAACGCAAAACGACAACGGCAAGCCAGCTGGTTCATGGCTCAACATTACTGAATGCCTTAATAGATTTCTCAATATTCTAAAAGAAAATTATGTGCCTCCCATTTTAATTCAAAAAATATTTAATCAGACTTTTCAATACATCAATGCAGAAATCTTTAATAGCCTTCTATTGCATAGAGAATGCTGCACATTCAACCATGGAGAATATATAAAATCAGGGCTAGCTGAACTAGAACTATGGTGTATTGAAGTAACGGAAGAGTATGTTGGCACATCTTTGGATGAACTTAACCATTCAAAACAAGCAGTTAGATTCTTGGTTGCTCTAGAGAAGGATGAACTATCCTATGATGATCTTACAAATGACATCTGCCCTGTCCTGAGTTCTCAACAGCTTTATAGAATATGTACACTATATTGGGATGAAAATGATAATACCAAAAGTGTATCATCAGAAGTCACTACTAGATTAAAGCTGCTAATGACAGATGATGTAGTTGATGATGACAAATATTTCTTGGTAGAAGATAATTCAAGTCTTCCTATTATTGTTGAAGAGATTTCTCATTCACATCAAGACAAGACAATTCCAAAAGTAAAACCTCCTGAAGAACTACTTGAGAATGCAGGCTTCCAATTTTTACATGATTATTGTTAG 4656 0.3814 MAAQLNYFVGSHVWVEDHDDAWIAGEILESNDHELTISFESGTRVVSKTANIYPKDPEFPPNGVDDMTRLAYLHEPGVLQNLQSRYTINEIYTYTGNILIAVNPFQRLPHLYANETMAKYKGAAFGEQSPHPFAIAGYAYRKMINEERSQAILVSGESGAGKTESTKMLMHYLAYLGGRAATEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPQEDIDRFKLGNPRSFHYLNQSNCIELDGLDDSKEYLATRRAMDVVGINSDEQDAIFRIVAAVLHLGNIEFVKAVDEGTDSSKPKDERSYFHLKTAAELLMCDEKSLEDSFCKRVMVTRGDTITKCLDPNSAALSRDALAKIVYSRLFDWIVDKINNSIGQDPTSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGVIALLDEACMFPRSTHETFAEKLYQTLKDNKRFSKPKLSRTGFTINHYAGDVTYQTDLFLDKNKDYVVPEHAALLCASKCSFVSGLFPPLPEETTKSTKFSSIAAQFKQQLQSLLETLNATEPHYIRCVKPNNLLKPGIFENNDVLQQLRCGGVMEAIRISCAGFPTRKNFDEFVQRFSILEPKVLTSCPDEMTACKRLLDKSNLKNYQIGKTKVFLRAGQMAELDACRAEVLGKSAIVIQKKGRTFICEKRYKLLRFSATELQRAIRGQLARHRYECMRRDAASLIIQKQFRMYLSKSAYKTTYAKAVCVQAGMRGMAARNELRFRKRTQAATVIQGHYRCYLAYSYFQSLKKATISVQCSWRRTSARRELRKLKMAAKESKALEAAKVVLEKQVEELTLCLEKEKRMREAKTQENEKLQCALEEMELKFEETKAKLIEERDAAMKVAEQSPTIQENHVVDNELVNKLTAENEKLKELVHSLKKKAKEELHEIVTDNEQIYKLCEENEQLKEMVDSLEKKTEQEFPANFTDNEVINKLTEEKEHFKGLVNSLEKKIDETEKKYEESSKISEERMNQIIETESKIIELKTYMQRLEEKLSDMESENQIFRQQALLSSSSKRMSEKSSPPVIPPLENGHQVPVISTTVKTLGSESVRRSHLERHQESVDTLFKCVTKDLGFSEGKPVAAFTLYNCLLHWKSFEADKTSIFDRLIQIIGSAIEDQDNNNCMAYWLSNTSALFFHLQRCLRVPARKPPTPTSFFGRMTQGFRSSNSLSSSAFDVINQVDAKYPALLFKQQLAAYVEKIYGIVRENMKKDLSPLLSSCIQEHRTQNDNGKPAGSWLNITECLNRFLNILKENYVPPILIQKIFNQTFQYINAEIFNSLLLHRECCTFNHGEYIKSGLAELELWCIEVTEEYVGTSLDELNHSKQAVRFLVALEKDELSYDDLTNDICPVLSSQQLYRICTLYWDENDNTKSVSSEVTTRLKLLMTDDVVDDDKYFLVEDNSSLPIIVEEISHSHQDKTIPKVKPPEELLENAGFQFLHDYC 1551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02717 1551 Gene3D - 787 834 - -
Car04g02717 1551 Gene3D - 736 786 - -
Car04g02717 1551 Gene3D - 835 884 - -
Car04g02717 1551 ProSiteProfiles Dilute domain profile. 1214 1496 IPR002710 -
Car04g02717 1551 Coils Coil 970 997 - -
Car04g02717 1551 Pfam Myosin head (motor domain) 64 722 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g02717 1551 ProSiteProfiles IQ motif profile. 833 862 IPR000048 GO:0005515
Car04g02717 1551 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 787 IPR027417 -
Car04g02717 1551 PANTHER MYOSIN HEAVY CHAIN 5 1548 - -
Car04g02717 1551 SMART MYSc_2a 56 735 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g02717 1551 Pfam IQ calmodulin-binding motif 763 780 IPR000048 GO:0005515
Car04g02717 1551 Pfam IQ calmodulin-binding motif 834 854 IPR000048 GO:0005515
Car04g02717 1551 Pfam IQ calmodulin-binding motif 788 806 IPR000048 GO:0005515
Car04g02717 1551 Coils Coil 1005 1025 - -
Car04g02717 1551 ProSiteProfiles IQ motif profile. 785 811 IPR000048 GO:0005515
Car04g02717 1551 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 788 884 IPR027417 -
Car04g02717 1551 Gene3D - 669 732 - -
Car04g02717 1551 Gene3D - 252 310 - -
Car04g02717 1551 CDD MyosinXI_CBD 1165 1518 IPR037975 GO:0007015
Car04g02717 1551 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g02717 1551 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g02717 1551 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g02717 1551 PRINTS Myosin heavy chain signature 431 459 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g02717 1551 PRINTS Myosin heavy chain signature 484 512 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g02717 1551 PANTHER MYOSIN 5 1548 - -
Car04g02717 1551 Coils Coil 1040 1074 - -
Car04g02717 1551 Pfam DIL domain 1372 1475 IPR002710 -
Car04g02717 1551 Pfam Myosin N-terminal SH3-like domain 10 48 IPR004009 GO:0003774|GO:0005524|GO:0016459
Car04g02717 1551 ProSiteProfiles IQ motif profile. 856 885 IPR000048 GO:0005515
Car04g02717 1551 Coils Coil 879 899 - -
Car04g02717 1551 MobiDBLite consensus disorder prediction 1122 1141 - -
Car04g02717 1551 ProSiteProfiles Myosin motor domain profile. 62 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g02717 1551 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Car04g02717 1551 ProSiteProfiles IQ motif profile. 810 837 IPR000048 GO:0005515
Car04g02717 1551 Gene3D Myosin VI head, motor domain, U50 subdomain 312 603 - -
Car04g02717 1551 SMART DIL_2 1371 1478 IPR002710 -
Car04g02717 1551 Coils Coil 1082 1116 - -
Car04g02717 1551 ProSiteProfiles IQ motif profile. 760 789 IPR000048 GO:0005515
Car04g02717 1551 CDD MYSc_Myo11 76 722 IPR036018 -
Car04g02717 1551 Gene3D Kinesin motor domain 65 664 IPR036961 -
Car04g02717 1551 Coils Coil 907 948 - -
Car04g02717 1551 Gene3D - 441 625 - -
Car04g02717 1551 SMART iq_5 807 829 IPR000048 GO:0005515
Car04g02717 1551 SMART iq_5 784 806 IPR000048 GO:0005515
Car04g02717 1551 SMART iq_5 736 758 IPR000048 GO:0005515
Car04g02717 1551 SMART iq_5 855 877 IPR000048 GO:0005515
Car04g02717 1551 SMART iq_5 759 781 IPR000048 GO:0005515
Car04g02717 1551 SMART iq_5 832 854 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02717 Car-Chr4 52493373 52512052 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02717 1 1548 Myosins gene family AT5G43900 60.114 0.0 1885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02717 K10357 - gmx:100788123 2435.6