Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02707 ATGTTGCTTCATTTCAATGAAATGTGGAAGCCAGTTTTGGTGATGATTATAGTTAATTTAGCTATGGCCTTTGTCAATGTATTTATGAAGAAGGTTATTAATGAAGGAATGGACCACTTGACCATTCTGACTTATCGACAGGCAATTTCAGCCATTTTCTTGGCACCTATTGCTTTCTTCTATGAAAGGGAAAGCAAGATGAATGGTCATATAATATGTCTCCTTTTTCTTAGTGCTCTTGTAGGAGTAACACTCAGCCAATACCTCTTTCTTGTTGGACTGGAATATACATCAGCAACCTTATCGTGCGCATTCCTCAATACGGTACCTGTATTCACGTTCATTATCGCGCTCCCATTGGGGATGGAGAAAGTGAGCATGAAAAGCAACAGTGCTAGAGCGAAAGTCTTGGGAACTTTAGTGTGCATTAGTGGAACTCTGTTATTGATCCTTTATAAAGGAATGCCCTTAATCAACCCTCAATCTCATCACATAGAAGACAAAGCCACAGCAACACCATCAGCCTCCAATTTAAAGAAATGGATTATAGGTTCAATGTTTCTGACTGCAGCTTGCCTCTTCTGGTCTTCATGGTTTCTTATACAAGACAGGGTTGGCAAAAAGTATCCATATCAATACTCTAGCACAGCCATTTTGTCACTATTTGCTTCCATCCAATGCGCAATATTACATTTGATCATCCAAAGAAACAATGCTAAATGGATTCTAAAAGGAAAGCTACAAATAATGGCTATTGTGTATTCTGGGCTAGTGGGATCAGGCTTGTGCTATGTGGCAATGTCATGGTGTGTCAAACAAAGAGGTCCGGTTTTTACTGCAGCTTTTACCCCACTTATACAGATGTTTGTGACAGTTCTTGATCTCTGTATATTACAAGAGCAAATTTATCTAGGAAGTTTTGTAGGATCAATCTTGGTTATTTCTGGCATGTATATTCTCCTGTGGGGTAAAAGTAAAGAGAGGAAACAGAATGCCTTGAAGGATACTGAAGAAAATCAAAAGGATGAAGAATGGCACAACAGTACCGCCAATCCCACTACTAATAAGTTAGAGACCAGTGAGTGA 1086 0.3913 MLLHFNEMWKPVLVMIIVNLAMAFVNVFMKKVINEGMDHLTILTYRQAISAIFLAPIAFFYERESKMNGHIICLLFLSALVGVTLSQYLFLVGLEYTSATLSCAFLNTVPVFTFIIALPLGMEKVSMKSNSARAKVLGTLVCISGTLLLILYKGMPLINPQSHHIEDKATATPSASNLKKWIIGSMFLTAACLFWSSWFLIQDRVGKKYPYQYSSTAILSLFASIQCAILHLIIQRNNAKWILKGKLQIMAIVYSGLVGSGLCYVAMSWCVKQRGPVFTAAFTPLIQMFVTVLDLCILQEQIYLGSFVGSILVISGMYILLWGKSKERKQNALKDTEENQKDEEWHNSTANPTTNKLETSE 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02707 361 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020|GO:0016021
Car04g02707 361 Pfam EamA-like transporter family 10 150 IPR000620 GO:0016020|GO:0016021
Car04g02707 361 PANTHER WAT1-RELATED PROTEIN 10 348 IPR030184 GO:0016021|GO:0022857
Car04g02707 361 MobiDBLite consensus disorder prediction 331 361 - -
Car04g02707 361 MobiDBLite consensus disorder prediction 331 345 - -
Car04g02707 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 153 - -
Car04g02707 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 327 - -
Car04g02707 361 MobiDBLite consensus disorder prediction 346 361 - -
Car04g02707 361 PANTHER WAT1-RELATED PROTEIN 10 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02707 Car-Chr4 52264523 52268459 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02707 9 329 Nodulin-like Gene Family AT1G11460 39.815 1.14e-83 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02707 - - gmx:100794199 536.184