Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02702 ATGTCTAACTGCAAGGAAACAACTAACGCCGTAACCGTCACTAACGGCACAACAACAGACTCTCAAAAGACCATCGCCGTTAAAAAACCGCCGTCAAAAGACCGTCACAGCAAAGTAGACGGACGTGGAAGAAGAATACGTATGCCAATTATTTGCGCCGCACGTGTTTTCCAGTTAACACGTGAGCTCGGTCACAAATCCGACGGTCAAACCATCGAATGGCTTCTCCGACAGGCGGAACCCTCCATCATCGCTGCCACCGGCACCGGAACTACTCCCGCTTCATTTTCATCTCTCTCTGAACACAAACCTTTTCACCCTCCTTCTCCTTTCATTCTCGGAAAACGGTTACGTTCTGAACAAGATGACGCCGTTTCCGTTGCTGCACCTACCGCTCCACCGGCTCTTTGGGCGCTTCCGTCAAGGCCTGACTTCGCTCAACTTTGGAGCTTCGCCGCCGCCGCAGCACAACCTCCGTCGGAAGTTCTTTCCATTTCTCCGCAACAGCAACAGCATAATTCGTTGTTtcatcatcaacagcagcagcaacaacaacatcaaGCTTCCATGGGAGAAGCTTCGGCGGCGAGGTTAGGGAATTACCTTCCTGGACATCTTAATTTGCTCGCTTCATTGTCCGGTAACGGAAATTCCGGTCGGGGAGACGACGAACATCATTGA 681 0.4905 MSNCKETTNAVTVTNGTTTDSQKTIAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSLSEHKPFHPPSPFILGKRLRSEQDDAVSVAAPTAPPALWALPSRPDFAQLWSFAAAAAQPPSEVLSISPQQQQHNSLFHHQQQQQQQHQASMGEASAARLGNYLPGHLNLLASLSGNGNSGRGDDEHH 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02702 226 MobiDBLite consensus disorder prediction 87 111 - -
Car04g02702 226 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 222 IPR005333 GO:0003700
Car04g02702 226 MobiDBLite consensus disorder prediction 160 193 - -
Car04g02702 226 MobiDBLite consensus disorder prediction 161 191 - -
Car04g02702 226 Pfam TCP family transcription factor 32 185 IPR017887 -
Car04g02702 226 MobiDBLite consensus disorder prediction 1 26 - -
Car04g02702 226 ProSiteProfiles TCP domain profile. 32 86 IPR017887 -
Car04g02702 226 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 222 - -
Car04g02702 226 MobiDBLite consensus disorder prediction 1 44 - -
Car04g02702 226 MobiDBLite consensus disorder prediction 27 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02702 Car-Chr4 52112383 52114318 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02702 14 223 TCP Transcription Factor Family AT5G23280 60.593 1.98e-81 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Car04g02702 TCP 1.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02702 K16221 - gmx:100786264 244.973