Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02701 ATGAATATGCATCAAATGGCTTCAAGGTTGGTTTTGATAATTATATCTATTTCATCATTGGCTTCAGCATCTAATCTTGAGGTGGGTTTCTATAGCTACACGTGTCCATCTGCTGAGACAATAGTGAGAAGCATTGTTAATAAAGCTGTTTCAGACAACCCTGGCATAGGTGCTGGATTGATCAGAATGCATTTTCATGATTGCTTTGTCAGGGGTTGTGATGCATCTGTGTTACTAGCATCAATACCAGGAAATCCAACGGCTGAGAGAGATAGCTTTGTCAACAATCCATCATTACGAGGCTTCGAGGTAATTGATGAGGCTAAGGCTGAATTAGAAGCCAAATGTCCGCAAACAGTATCGTGTGCGGACATTCTTACCTTTGCAGCACGAGATAGTGCTCTCAAACTTGGTAACATAAACTACAATGTACCATCAGGACGAAGAGACGGTCGTGTCTCTATCGCTGATGAAGTGCCACAAAATGTACCCGGACCTTCCTTTAATGCTGACCGACTTATAACAACTTTTGCTAAAAAAGGGTTATCAAAAGATGAAATGGTTACACTCTCCGGAGCGCATTCAATTGGTGTATCACATTGTTCTTCTTTCTCGAATCGATTATACTCATTCGATGACGCAAATGCTATAGATCCTTCTATGGACCCTTCATTTGTTGAATTGTTGAAAACAAAGTGTCCTAAACCACCAAGTAACATTGATCCAATTGTGGTGCTTGATGCTATTACACCTATTCGTTTGGATAATGTGTATTATGAGGGATTGATTAACCATCAAGGCTTGTTGGGTTCAGATCAAACACTATTGAGTAGTGAATCAACAAAAGAAATTGTGTTAAGTAATGCTAATTATGGTGCTCATTGGGCTACTAAGTTTGCGGAAGCAATGGTTCACATGGGTTCTATTGATGTGTTAACTGGCTATGATGGTGAAATTAGGAAATATTGCAACTTTGTAAATTAA 984 0.3923 MNMHQMASRLVLIIISISSLASASNLEVGFYSYTCPSAETIVRSIVNKAVSDNPGIGAGLIRMHFHDCFVRGCDASVLLASIPGNPTAERDSFVNNPSLRGFEVIDEAKAELEAKCPQTVSCADILTFAARDSALKLGNINYNVPSGRRDGRVSIADEVPQNVPGPSFNADRLITTFAKKGLSKDEMVTLSGAHSIGVSHCSSFSNRLYSFDDANAIDPSMDPSFVELLKTKCPKPPSNIDPIVVLDAITPIRLDNVYYEGLINHQGLLGSDQTLLSSESTKEIVLSNANYGAHWATKFAEAMVHMGSIDVLTGYDGEIRKYCNFVN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02701 327 PANTHER PEROXIDASE 15 325 - -
Car04g02701 327 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g02701 327 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g02701 327 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g02701 327 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g02701 327 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g02701 327 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g02701 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g02701 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g02701 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g02701 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Car04g02701 327 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Car04g02701 327 ProSiteProfiles Plant heme peroxidase family profile. 25 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g02701 327 SUPERFAMILY Heme-dependent peroxidases 26 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car04g02701 327 CDD secretory_peroxidase 25 326 IPR033905 GO:0004601|GO:0042744
Car04g02701 327 PANTHER PEROXIDASE 25-RELATED 15 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g02701 327 Pfam Peroxidase 42 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g02701 327 Gene3D Peroxidase, domain 2 164 306 - -
Car04g02701 327 Gene3D - 29 327 - -
Car04g02701 327 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g02701 327 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g02701 327 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g02701 327 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g02701 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02701 Car-Chr4 52082354 52084300 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02701 29 327 Peroxidase AT4G36430 45.183 1.18e-87 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02701 K00430 - gmx:100815350 475.707