Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02688 ATGTTTCCGAATGAGAATAATAATAACGGCTaccaccaccaaccaccaccgccgccGGGAATGTTACAAACTCATAATCACAGAGACCGAGCCCGCCGTGGCACTCGCCGGTCACGTGCTTCCACTTCTTCTCCCCTTATTAGGGTTTCCGATACTGAGCAACAGCAACAACTTCAACCTCAACCTCATCGACCTCCTTGCACCGATTACGACATGGCTTATTTCCATTCCTACGCTCACCTCGGTATTCACCAGGAGATGATCAAGGATCATGTGCGGACTGAAACATATAGGGAAGCAATCATGCGTCATCAGAGTTTTATTGCTGGCAAAGTCGTAGTTGACGTTGGATGCGGTACAGGAATCCTTTCCATATTTTGTGCTCAGGCCGGTGCAAAGCGGGTGTATGCAGTTGATGCTAGTGACATTGCTCTGCAGGCAAATGAAGTCGTTAAAGCAAATAACCTGTCTGATGTTGTTATTGTATTGCATGGACGAGTTGAGGATGTTGAAATTGAGGAAGAGGTGGATGTTATAATTTCAGAATGGATGGGTTATATGCTTCTATATGAGAGCATGCTTGGGAGTGTGATTACTGCTAGAGATCGCTGGCTGAAACCTGGTGGTCTCATTCTTCCCTCAAGTGCAAATTTGTACATGGCTCCTGTCACACATACCGACAGATACAATGACAGCGTCGACTTTTGGCGCAATGTTTATGGAATTGATATGTCTGCCATGTTATCATTAGCAAAACAGTGTGCATTCGAGGAACCTTCTGTGGAGATGATAACTGGTGAAAATATTTTGTCATGGCCACATTTGGTAAAACATATTGATAGTTATTCTGTTACCATCAATGAGTTAGAAACTGTAACAACGAAGTTTAAGCTCAAATCAATGATGCGAGCTCCATTACATGGTTTTGCATTTTGGTTTGATGTTGAATTTAATGGGCCTACAATAGAACCAACCAATTATCATTCATCAACATCATTTACTGAGAATCATCAGGGGAACGGTAGTCTGAGCAAAAAAAGGCCCAATCCAAATGAAGCACTGGTCCTATCCACTGCACCCGAGGAACCTCCAACACATTGGCAGCAGACCCTGATATACTTCTATGATCCTATTGAGCTGGAACAAGATCAACTAATTGAAGGTTTAGTGACGTTGACACAAAGCAAAGAAAATGCTCGGTTTATGAATATTCACCTTGAATATACTTCAGGCAATCGATCTTATGTGAAAGAGTCTGTTATGAGATGA 1269 0.4145 MFPNENNNNGYHHQPPPPPGMLQTHNHRDRARRGTRRSRASTSSPLIRVSDTEQQQQLQPQPHRPPCTDYDMAYFHSYAHLGIHQEMIKDHVRTETYREAIMRHQSFIAGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIALQANEVVKANNLSDVVIVLHGRVEDVEIEEEVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLILPSSANLYMAPVTHTDRYNDSVDFWRNVYGIDMSAMLSLAKQCAFEEPSVEMITGENILSWPHLVKHIDSYSVTINELETVTTKFKLKSMMRAPLHGFAFWFDVEFNGPTIEPTNYHSSTSFTENHQGNGSLSKKRPNPNEALVLSTAPEEPPTHWQQTLIYFYDPIELEQDQLIEGLVTLTQSKENARFMNIHLEYTSGNRSYVKESVMR 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02688 422 Gene3D - 215 421 - -
Car04g02688 422 PANTHER BNAC03G41340D PROTEIN 26 419 - -
Car04g02688 422 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 26 419 IPR025799 GO:0016274|GO:0018216
Car04g02688 422 MobiDBLite consensus disorder prediction 328 350 - -
Car04g02688 422 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 71 405 IPR025799 GO:0016274|GO:0018216
Car04g02688 422 MobiDBLite consensus disorder prediction 38 63 - -
Car04g02688 422 MobiDBLite consensus disorder prediction 328 347 - -
Car04g02688 422 CDD AdoMet_MTases 113 165 - -
Car04g02688 422 Gene3D Vaccinia Virus protein VP39 68 213 IPR029063 -
Car04g02688 422 Pfam Ribosomal protein L11 methyltransferase (PrmA) 109 183 - -
Car04g02688 422 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 412 IPR029063 -
Car04g02688 422 MobiDBLite consensus disorder prediction 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02688 Car-Chr4 51764931 51779954 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02688 74 388 C2H2 Transcription Factor Family AT3G12270 39.091 1.49e-64 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02688 K11437 - gmx:100809174 680.633