Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02670 ATGTCTCAATCTCTAGTATTCAAAGTAAAGAGGCATGAGCCAGAATTAGTAAAACCATCAAAACCCACACCAAATGAAACAAAACTTCTGTCAGACATAGATGACCAAGATGGGTTACGTTTTCAAATTCCAGTTGTACAATTTTATAACTATGATCCAAATATGAAAGGGAAAGACCCTGTTGATGTAATTAGAAAAGCTTTGGCAAAAACACTTGTGTTTTATTATCCATTTGCTGGTAGATTGAGGGAAGGTAATGATAGAAAGCTTATGGTTGATTGTAATGGTGAAGGTGTTTTGTTTATTGAAGCTGATGCTGATGTTAGTGTTGAAGAATTTGGTGGTCAACTTCAACCTCCTTTTCCTTGTTGGGATCAACTTCTCTTTGAT 390 0.3538 MSQSLVFKVKRHEPELVKPSKPTPNETKLLSDIDDQDGLRFQIPVVQFYNYDPNMKGKDPVDVIRKALAKTLVFYYPFAGRLREGNDRKLMVDCNGEGVLFIEADADVSVEEFGGQLQPPFPCWDQLLFD 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02670 130 Pfam Transferase family 8 122 - -
Car04g02670 130 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 129 - -
Car04g02670 130 Gene3D - 7 130 IPR023213 -
Car04g02670 130 PANTHER ALCOHOL ACYLTRANSFERASE 7 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02670 Car-Chr4 51214617 51215006 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02670 7 114 Monolignol Biosynthesis Gene Families AT5G48930 37.963 6.47e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02670 K19861 - cam:101494164 271.552