Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02669 ATGTCTCAATCTCTAGTATTCAAAGTAAAGAGGCATGAGCCAGAATTAGTAAAACCATCAAAACCCACACCAAATGAAACAAAACTTCTGTCAGACATAGATGACCAAGATGGGTTACGTTTTCAAATTCCAGTTGTACAATTTTATAACTATGATCCAAATATGAAAGGGAAAGACCCTGTTGATGTAATTAGAAAAGCTTTGGCAAAAACACTTGTGTTTTATTATCCATTTGCTGGTAGATTGAGGGAAGGTAATGATAGAAAGCTTATGGTTGATTGTAATGGTGAAGGTGTTTTGTTTATTGAAGCTGATGCTGATGTTAGTGTTGAAGAATTTGGTGGTCAACTTCAACCTCCTTTTCCTTGTTGGGATCAACTTCTCTTTGATGTTCCTGGTTCTTCTCAAGTTATTAATACTCCTCTGCTTCTTATTCAGGTAACACGTCTTAAGTGTGGTGGTTTCATTTTTGCTCTTCGTCTAAACCACACAATGAGCGACGCAGCAGGTTTGGTTCAATTCATGAATGCGTTAGGAGAAATATCTCGTGGCATGAACGAACCTTCAATTCCACCAGTGTGGTATAGAGAGCTTTTGAATGCAAGGGACCCACCAAGAGTGACGTGTACTCATCGCGAATACGAACAAATACCCGACACTAAAGGAACCATCATCTCCTTAGATGACATGGACCACCGCTCTTTCTTCTTCGGTCCCACCGAGGTAGCGGCAATTCGCGCTCTCCTTCCACCTcaccaacaacaacaacatcaacaCTCCAATTTCGAGATCCTCACGGCATGTCTCTGGCGTTGTCGAACAATCGCGTTGCAACCAGACACAGACGAGGAAGTTCGCATAATCTGCATCGTCAACGCGCGTGGCAAGTTTAATCCTCCGTTACCTAACGGTTTTTACGGTAACGCTTTTGCGTTTCCCGTTGCAGTTACAACTGCTGGGAAACTAATTGAAAATCCGTTGGGGTATGCATTGGAGTTAGTTAGGAAAGCAAAAGCTGATGTCACTGAAGAATATATGCATTCAATTGCAGATTTAATGGTTACAAACGGTCGACCACATTTTACTGTGGTGAGATCGTATCTTGTGTCGGATGTGACACGTGCTGGTTTTGGAGAGGTGGAGTTTGGTTGGGGGAAAGCTGTTTATGGTGGGCCAGCTAAAGGAGGAGTTGGTGCTATTCCTGGTGTTGCTAGCTTTTACATACCTTTTAAAAATGATAAAGGAGAGGAAGGTTTGGTTATACCGGTTTGTTTGCCAACTCAAGCAATGGAGAGGTTTGTTAAAGAGTTGGATCATGTGCTCAACAACAACAACATTAACCAAACTATTAAGGGTGGTCTAAAATCTGGTTTTATTATTTCTTCCTTGTAG 1392 0.4109 MSQSLVFKVKRHEPELVKPSKPTPNETKLLSDIDDQDGLRFQIPVVQFYNYDPNMKGKDPVDVIRKALAKTLVFYYPFAGRLREGNDRKLMVDCNGEGVLFIEADADVSVEEFGGQLQPPFPCWDQLLFDVPGSSQVINTPLLLIQVTRLKCGGFIFALRLNHTMSDAAGLVQFMNALGEISRGMNEPSIPPVWYRELLNARDPPRVTCTHREYEQIPDTKGTIISLDDMDHRSFFFGPTEVAAIRALLPPHQQQQHQHSNFEILTACLWRCRTIALQPDTDEEVRIICIVNARGKFNPPLPNGFYGNAFAFPVAVTTAGKLIENPLGYALELVRKAKADVTEEYMHSIADLMVTNGRPHFTVVRSYLVSDVTRAGFGEVEFGWGKAVYGGPAKGGVGAIPGVASFYIPFKNDKGEEGLVIPVCLPTQAMERFVKELDHVLNNNNINQTIKGGLKSGFIISSL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02669 463 PANTHER - 8 446 - -
Car04g02669 463 Pfam Transferase family 8 438 - -
Car04g02669 463 Gene3D - 217 437 IPR023213 -
Car04g02669 463 Gene3D - 7 216 IPR023213 -
Car04g02669 463 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02669 Car-Chr4 51169798 51174201 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02669 8 437 Monolignol Biosynthesis Gene Families AT5G48930 29.148 1.11e-49 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02669 K19861 - gmx:100797017 761.525