Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02667 ATGAATCACTTTTTTCCTGAAAAACTTCTAGGTGAAGTTTTCTTTGATGAACCTCTTTCATCTACAAATCAAAGTAATTTTGTTCATGCACAACAACAACCTTATTCTACACAAAATCCAAGTGCTTTTGTTCAATATAGAGACCAACCCATAATTAGTTTTGGTGAAGAGAGTTCTTTAAAAGGGTCTAATTCAAATTCCATGAACAAGCGAATGGTTGCATTTTTGAGAAAAAAAGTGGCTTTAGAGAGAAATAAAGCGGTGGAATGTGAAAGAGAACGTGGTTATAAACACATGATTAGTGAAAGAATGAGGAGACAAAGACAGAGACAGTGTTGTTTGAATTTACATTCAGTGTTACCTCATGGAACCAAAACAGATAATAATTCGGTAGTGCAAACAGCAGCTAAGGAAATTCAAAGGCTACAAAGATGCCAAGAGGAATTGGAGAGGAAAAACTTTGAGCTTGAATCAAATGTTGTTGATGGAAGAAAATTTAAGTATTTGAGAGTGCCAAATCCTACATCTGGAATTGATTCTATAGTTGAGACACTCAAATGCTTGAAAGGTCATGGTGTGGATACTAGAAGCATCAAGTCCAATTTTTCAAAGAAGGAATTGTTTGCAGCCTTAGAGCTAGAAAATGAGTTTGTTGAAAGATTGCAGGTAGTGATGTGGAAAGGACTATTCAAAGAACACTCGATGAACTTGAGAGGAAGCTTCATTCCCATGTCCCGGAATGTCCTAATAAGCAAATAA 759 0.357 MNHFFPEKLLGEVFFDEPLSSTNQSNFVHAQQQPYSTQNPSAFVQYRDQPIISFGEESSLKGSNSNSMNKRMVAFLRKKVALERNKAVECERERGYKHMISERMRRQRQRQCCLNLHSVLPHGTKTDNNSVVQTAAKEIQRLQRCQEELERKNFELESNVVDGRKFKYLRVPNPTSGIDSIVETLKCLKGHGVDTRSIKSNFSKKELFAALELENEFVERLQVVMWKGLFKEHSMNLRGSFIPMSRNVLISK 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02667 252 PANTHER TRANSCRIPTION FACTOR BHLH92 21 217 - -
Car04g02667 252 Pfam Helix-loop-helix DNA-binding domain 97 143 IPR011598 GO:0046983
Car04g02667 252 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 93 142 IPR011598 GO:0046983
Car04g02667 252 Gene3D - 90 167 IPR036638 GO:0046983
Car04g02667 252 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 21 217 IPR044658 -
Car04g02667 252 Coils Coil 132 159 - -
Car04g02667 252 SMART finulus 99 148 IPR011598 GO:0046983
Car04g02667 252 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 85 153 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02667 62 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 38.272 2.23e-27 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02667 - - gmx:100815874 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02667 04 51135624 51138162 Car04g02667 04 51135624 51138162 ECH