Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02664 ATGGAAAAAAATGTGGAATATGGAAATGATCTCAATTTCAATGAAACAGAACTTAGATTGGGGTTACCAGGAACAGAGGAAAAGAAGGAGAAAACCAAAACAATGCAAGGTAGTATTAAAAATAATAAAAGACAATTACCTCAAACTTCTGAAGAATCTGTTTCAATTTCTAAGGCTTCAACTGATCAACATGTGGAGAGTGCTGCAGCCCCTCCTTCCAAGGCAAAGATAGTTGGATGGCCACCAATAAGATCTTACAGAAAAAATAGTTTGCAAGAGGCTGAAGTTGGTGGGATCTTTGTTAAAGTGAGCATGGATGGAGCTCCTTATCTTAGAAAGATTGATTTAAGGGTTTATGGGGATTACCAAGAACTCCTCAAAGCTCTAGAAACCATGTTCAAGTTGACCATAGGTGAGTATTCTGAAAGAGAGGGTTATAAGGGGTCTGAATATGCACCAACCTATGAAGACAAGGATGGTGATTGGATGCTAGTGGGAGATGTTCCATGGGACATGTTTGTGACTTCTTGCAAAAGGCTAAGAATCATGAAAGGCACAGAAGCTAGAGGTTTGGGTTGTGGTGTATGA 588 0.3946 MEKNVEYGNDLNFNETELRLGLPGTEEKKEKTKTMQGSIKNNKRQLPQTSEESVSISKASTDQHVESAAAPPSKAKIVGWPPIRSYRKNSLQEAEVGGIFVKVSMDGAPYLRKIDLRVYGDYQELLKALETMFKLTIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGTEARGLGCGV 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02664 195 MobiDBLite consensus disorder prediction 1 72 - -
Car04g02664 195 PANTHER AUXIN-INDUCED PROTEIN 1 192 - -
Car04g02664 195 Pfam AUX/IAA family 15 192 IPR033389 -
Car04g02664 195 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 192 IPR003311 GO:0005634|GO:0006355
Car04g02664 195 MobiDBLite consensus disorder prediction 21 37 - -
Car04g02664 195 MobiDBLite consensus disorder prediction 38 67 - -
Car04g02664 195 SUPERFAMILY CAD & PB1 domains 89 184 - -
Car04g02664 195 ProSiteProfiles PB1 domain profile. 98 185 IPR000270 GO:0005515
Car04g02664 195 Gene3D - 92 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02664 Car-Chr4 51074569 51077177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02664 101 191 B3 DNA Binding Superfamily AT2G46530 37.363 1.71e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Car04g02664 AUX_IAA 3.8e-53 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02664 K14484 - gmx:100800212 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02664 04 51074569 51077177 Car04g02664 04 51074569 51077177 ECH
Car04g02664 04 51074569 51077177 Car04g00152 04 1528480 1530223 ECH