Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02663 ATGGAACCTTATCATCACCTATTCACCCTACTCCTACTCCTCCTTCTTTTCCCTTCTTTTCTTGAATCTCAAACTCAAAGACAAGAAAACAACACTGGCTACACATGCAACAAAAACCAAACCAACAACAATTATCCATGTCAAGCCTATGCTTATTATAAATCAACATCACCAAATTTTCTTGACTTAGCTACCATAGGTGACCTTTTTTCACTTAGTCGTTTAGCTATATCAAAACCAAGTAATATATCTTCTCCTTCTTCTCCTTTAATTCCTAATCAACCCCTTTTAATTCCCTTAACTTGTTCTTGCAATTTCATCAACAAAACTTTTGGTTCAATTTCTTATTCCAACATCACTTATACCATAAAACCAAGTGACACTTTTTTTATTGTTTCAACTATCAATTTTCAAAATCTCACTACCTACCCTTCAATTGAAGTTGTTAATCCATCTTTGGTACCTACTAATCTCTCAATTGGTGAGAATGTTGTGTTGCCTATCTTTTGCATGTGTCCTAAAAAAATTAAATCAAGTTCAAATATTTCAAATTTTGCAAATTACATGATATCCTATGTTGTTCAACCTTTAGATAATGTTTCATCTATTGCTTCAATGTTTGGAACAAATGAAAAGTCTATAGTTGATGTGAATGGTGAAAAACTTTATGATTATGATACCATCTTTGTTCCTATTGATAAATTGCCTATTTTGAAACAACCTATTGTTCTTCCTCCAAGTGGAAATTCTAATGATGATAAAATTATTAGAGATTTGGCTATTGGATTGGGATTTATTGGATTCATGTTGCTTTTGGTTATAGGAATTTGGATTTATAGAGAGGTTCTTTTTAAGGATAGGTTATGGATGGTGAAAATGAAATTAGGGAGGGAATTGTATTTTGGACAAAAAGGGaataaagaaaataataataacaataataataataataacaaAGTGGATGTGAAGTTAATTGCAAACGTGTCGGATTGTTTGGACAAGTATAGAGTTTTTGGGATTGAAGAATTGTTGGATGCAACTAATGGGTTTGATGAAAGTTGTTTGATTCAAGGAAGTGTTTATAAAGGTTCAATTGATGGACAAGTTTATGCAATCAAGAAGATGGAGTGGAATGTTTATGAGGAGCTCAAAATCTTGCAAAAGGTTAACCATGGGAATTTGGTGAAGTTGGAAGGGTTTTGCATTGACCCAGCAGAAACAAATTGCTATCTAGTCTATGAATATGTTGAGAATGGATCTCTCTACTCATGGCTTCACGAGGGCAAAAATGAAAAGCTAAATTGGGTAACAAGGTTAAGAATAGCCATTGACATTGCAAATGGTCTATTATACATTCATGAACACACAAGACCAAAAGTTGTACACAAAGACATTAAGAGTAGCAACATTCTCTTAGACTCAAACATGAGAGCAAAAATTGCAAATTTTGGTCTAGCAAAAAGTGGAATGAATGCAATCACAATGCACATTGTTGGAACACAAGGGTACATTTCTCCTGAATATTTAGCTGACGGTATTGTGTCAACAAAAATGGATGTATTCTCTTTTGGGGTTGTGCTACTTGAATTGATTTCTGGTAAGGAAGCCATTGACGAAGAGGGAAATCTTTTGTGGGATAGTGCTATAAAAACATTTGAATTGAATAATGAGCAAGAAAAGGCTAGGAGATTGAAGAGATGGTTGGATGAGGATATTTTAAAGGAGACATGTTCAATGGAAAGTTTGATGGGTGTACTTCATGTTGCAATTGCTTGTTTGCATAGAGATCCATCAAAAAGGCCTAGTATTATGGATATTGTTTATGGGCTTAGTAAAAGTGAAGATACTGGGTTTGAACTCTCTGATGAAGGGATTGGTTCACCAAGGTTGATGGCTAGGTGA 1902 0.337 MEPYHHLFTLLLLLLLFPSFLESQTQRQENNTGYTCNKNQTNNNYPCQAYAYYKSTSPNFLDLATIGDLFSLSRLAISKPSNISSPSSPLIPNQPLLIPLTCSCNFINKTFGSISYSNITYTIKPSDTFFIVSTINFQNLTTYPSIEVVNPSLVPTNLSIGENVVLPIFCMCPKKIKSSSNISNFANYMISYVVQPLDNVSSIASMFGTNEKSIVDVNGEKLYDYDTIFVPIDKLPILKQPIVLPPSGNSNDDKIIRDLAIGLGFIGFMLLLVIGIWIYREVLFKDRLWMVKMKLGRELYFGQKGNKENNNNNNNNNNKVDVKLIANVSDCLDKYRVFGIEELLDATNGFDESCLIQGSVYKGSIDGQVYAIKKMEWNVYEELKILQKVNHGNLVKLEGFCIDPAETNCYLVYEYVENGSLYSWLHEGKNEKLNWVTRLRIAIDIANGLLYIHEHTRPKVVHKDIKSSNILLDSNMRAKIANFGLAKSGMNAITMHIVGTQGYISPEYLADGIVSTKMDVFSFGVVLLELISGKEAIDEEGNLLWDSAIKTFELNNEQEKARRLKRWLDEDILKETCSMESLMGVLHVAIACLHRDPSKRPSIMDIVYGLSKSEDTGFELSDEGIGSPRLMAR 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02663 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Car04g02663 633 Gene3D Phosphorylase Kinase; domain 1 320 415 - -
Car04g02663 633 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 7 629 - -
Car04g02663 633 Gene3D Transferase(Phosphotransferase) domain 1 416 622 - -
Car04g02663 633 PANTHER - 7 629 - -
Car04g02663 633 Pfam LysM domain 192 230 IPR018392 -
Car04g02663 633 ProSiteProfiles Protein kinase domain profile. 293 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02663 633 SUPERFAMILY Protein kinase-like (PK-like) 335 608 IPR011009 -
Car04g02663 633 ProSiteProfiles LysM domain profile. 190 237 IPR018392 -
Car04g02663 633 SMART serkin_6 350 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02663 633 Pfam Protein kinase domain 366 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02663 633 SMART LysM_2 120 167 IPR018392 -
Car04g02663 633 SMART LysM_2 191 231 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02663 Car-Chr4 50998500 51005497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02663 33 612 Receptor kinase-like Gene Family AT2G23770 33.443 6.91e-79 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Car04g02663 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02663 - - lang:109352405 867.455