Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02654 ATGGAACGGCGGCAACAATCACCACCGCCGACGCCGCCTCCAACACCGCCGTCACGTGTTATACTCGGGAAATACCAAATTACGAAGTTCCTTGGACGCGGAAACTTCGCGAAGGTATACCAAGCACGTTCACTACAAGACGGTTCAACCGTCGCCGTAAAAGTGATCGACAAATCCAAAACGGTAGACGCATCAATGGAACCACGAATCGTTCGAGAAATCGACGCCATGCGCCGTCTTCAAAATCATCCAAACATACTCAAAATCCACGAAGTTTTAGCCACGAAAACTAAGATCTACCTCATCGTCGATTTAGCAGGCGGCGGCGAGCTTTTCTACAAACTCTCACGGCGCGGTAAGTTTTCAGAGTCTCTCGCACGTCGTTACTTTCAACAACTCGTCTCCGCTCTTTGTTTCTGCCACAAAAACGGCGTCGCTCACCGTGATCTCAAACCGCAGAATCTCCTTCTCGACGCTGATGGAAACCTAAAAGTCTCCGATTTCGGTCTCTCGGCGTTACCGGAACAGCTTAAAAACGGACTCCTACACACCGCTTGCGGCACGCCAGCGTACACCGCGCCGGAGATTCTCGGCCGGATCGGTTACGACGGATCAAAAGCCGACGCGTGGTCGTGCGGCGTAATCCTCTACGTTCTTCTCGCTGGTCACCTTCCGTTCGACGATTCCAACATTCCGGCTATGTGTAAGAGAATCACGCGGCGCGATTATCAGTTTCCGGAGTGGATTTCAAAACCAGCGCGTTATTTAATCTATCAGTTACTTGACCCGAACCCGAAAACTCGAATTAGGTTAGAAAACGTTTTTGGGAACACGTGGTTTAAAAGATCGTTAAAAGAAGAACCTGAAGAGAAAGTTTTCGAATTTGATTTATATAATAAGTATTGTTGCGATAAGAAATTAGAGTTTGGGATGAATGCGTTTGAGATAATATCGATGTCGCCTGGTTTGGATTTGAGTCGTTTATTTGAAACGACGTCGTTTAAGAGGGAGAAGAGGTTTAGTTCTAGGGAGGAAATTGTTGTAGTGGAAGAGAAAGTGAAAGAAATTGGAGTGAAATTAGGGTTTAGGGTTGAGATTGGGAAAAATGGAGCAATTGGGTTGGGGAAAGGAAAGGTAACTATTGTTGTTAAAGTGTTTAAGATTGTGGATGATTTGTTGTTGATAGTTATTAAATTGGAGAGTGGTGGGTATGAGTTTGAAGATGTTTATTGGAATGATTGGAAAATTGGGCTTCAAGATGTTGTACTTGCTTGGGATATGAATGAATCCAACTTGGGTATGTGA 1305 0.4536 MERRQQSPPPTPPPTPPSRVILGKYQITKFLGRGNFAKVYQARSLQDGSTVAVKVIDKSKTVDASMEPRIVREIDAMRRLQNHPNILKIHEVLATKTKIYLIVDLAGGGELFYKLSRRGKFSESLARRYFQQLVSALCFCHKNGVAHRDLKPQNLLLDADGNLKVSDFGLSALPEQLKNGLLHTACGTPAYTAPEILGRIGYDGSKADAWSCGVILYVLLAGHLPFDDSNIPAMCKRITRRDYQFPEWISKPARYLIYQLLDPNPKTRIRLENVFGNTWFKRSLKEEPEEKVFEFDLYNKYCCDKKLEFGMNAFEIISMSPGLDLSRLFETTSFKREKRFSSREEIVVVEEKVKEIGVKLGFRVEIGKNGAIGLGKGKVTIVVKVFKIVDDLLLIVIKLESGGYEFEDVYWNDWKIGLQDVVLAWDMNESNLGM 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02654 434 Pfam NAF domain 311 365 IPR004041 GO:0007165
Car04g02654 434 CDD CIPK_C 312 419 - -
Car04g02654 434 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Car04g02654 434 ProSiteProfiles Protein kinase domain profile. 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02654 434 PANTHER SERINE/THREONINE KINASE 16 427 - -
Car04g02654 434 Gene3D Kinase associated domain 1, KA1 313 423 - -
Car04g02654 434 Gene3D Transferase(Phosphotransferase) domain 1 18 312 - -
Car04g02654 434 SUPERFAMILY Protein kinase-like (PK-like) 21 291 IPR011009 -
Car04g02654 434 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Car04g02654 434 SMART serkin_6 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02654 434 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 16 427 - -
Car04g02654 434 Pfam Protein kinase domain 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02654 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02654 Car-Chr4 50858255 50859897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02654 1 425 Miscellaneous Gene Families AT3G23000 56.019 6.90e-168 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Car04g02654 Pkinase 1.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02654 K12761 - gmx:100305372 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02654 04 50858255 50859897 Car04g02654 04 50858255 50859897 ECH