Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02634 ATGCCATTGAGGCAAATGAAAGAGAGCTCAGAACAACACCTTGTGATCAAACCCAATTTGCAAAATCCCATGAATCAAGCTAAGAAAGTTACTAGAGCTGTTCAAAATGGAAAAGGTCCACCACCATTGACACAAGAGCCTCATAATCAAACTTCACCTCAAGCAAGGACTGGTGGAAGAAGAAGGAGTAGAGTTGGTGGCAGAAAATCTGATCAAGGGGATGTTTTGATGAGACCAAGTTGTAGACCTTGTACTGTTGTGAAAAACACTGAAAATGGAAACACAGTCTCTAGTGATGTAGAGATGAGTTTCCCTACCTCAAGCAAGTCTTTGAGCTTTGCTCCTCGGCCGGGCTATGGACAAGTTGGTACAAAATGCATTGTTAAAGCCAACCATTTCTTTGCAGAATTACCAGACAAGGATTTGAATCAGTATGATGTAACTATTACACCCGAAGTATTGTCAAAAGCGGTAAATAGATCCATCATAGCTGAACTTGTGAGACTGTATAAAGAGTCTGACCTTGGAATGAGGCTTCCAGCATATGATGGTAGAAAAAGTCTGTACACAGCAGGGGTTCTTCCCTTTTCTTGGAGAGAGTTTAAGATTAAGCTTATAGAAGAAGAAGACGCAATTAATGGCCCCAAAGAATACAAAGTGGTGATCAAGTTTGTTGCTAGGGCCAACTTGCATCACTTAGGGCAGTTTCTAGCTGGCAAGCGAGCTGATGCACCACAAGAGGCAATTCAAATTCTTGACATCGTTCTAAGAGAGTTAGCGTCCAAGAGGTTTTGTCCCATTGGGAGGTCCTTTTTTTCACCCGATATTAGAGCACCACAACGGCTCGGAGAAGGATTGGAGTCATGGTGTGGATTTTACCAGAGTATAAGACCTACTCAGATGGGCCTTTCCCTCAATATCGACATGGCTTCTGCGGCATTCATTGAACCTCTTCCAGTGGTGGAATTTGTCGGCCAGCTATTAGGAAAAGATGTGCTGTCAAGACAGTTATCTGATGCTGATCGCATTAAGATTAAGAAAGCTCTTAGAGGAGTTAAAGTTGAAGTAACGCACCGAGGGAGTGTTAGACGAAAGTATCGTGTTTCAGGTTTAACATCACAACCAACAAGAGAACTTGTATTTCCTGTTGATGAGAATTCAACTATGAAATCAGTAGTTGAATACTTCCAAGAGATGTACGGTTTCACTATTAAACATACTCACCTTCCTTGCCTTCAAGTTGGTGGAAATCAAAAGAAAGCAAACTATTTACCGATGGAGGCCTGCAAAATTGTCGAGGGGCAACGATATACCAAAAGGTTAAATGAAAAGCAAATTACGTCTCTCCTCAAAGTCACTTGCCAGAGACCCCGTGATCGAGAAAATGACATTTTGCGGACTATTCAGCATAATGCATACGATCAAGATCCTTATGCAAAGGAATTTGGGATTAAAGTCAGCGAGAAGCTAGCTACTGTTGAAGCCCGAATTCTTCCTGCTCCATGGCTTAAATATCATGAGAGTGGAAAGGAAAAAAATTGTTTACCCCAAGTTGGCCAGTGGAATATGATGAACAAGAAAATGATTAACGGAATGAATGTTAGCCGTTGGGCATGCATAAATTTTTCACGAAGCGTGCAGGATAGTGTTGCTCGTACTTTTTGTAACGAGCTTGCGCAAATGTGTCAAGTATCTGGCATGGAATTTAATCTAGACCCTGTGATCCCCATCTACAATGCCAAACCTGAGCAAGTAGAGAAAGCTTTGAAGCATGTTTACCATGTTTCGTCGAACAAAATTAAAGGAAAGGAATTGGAGCTTTTGTTAGCAATTTTGCCCGACAACAATGGCTCTCTCTATGGTGATCTCAAGCGTATTTGTGAGACTGACCTTGGTTTAATTTCTCAATGTTGTCTGACAAAGCATGTCTTTAAGATCACCAAGCAGTACTTGGCCAATGTGTCTCTGAAGATCAACGTTAAGATGGGTGGTAGAAACACCGTTCTTGTTGATGCCGTAAGTTGCAGAATACCATTAGTTAGTGACATACCGACAATAATATTTGGAGCAGATGTTACGCACCCTGAAAATGGGGAAGACTCCAGCCCCTCAATAGCAGCTGTAGTAGCGTCACAAGATTGGCCTGAAGTTACAAAGTATGCAGGTTTAGTTTGTGCTCAACCTCAAAGGCAAGAACTTATACAAGATTTGTACAAAACATGGCACGACCCTGTTCGTGGCGTAGTTAGTGGTGGCATGATCCGAGATTTGTTGGTTTCCTTTAGAAAGGCAACAGGACAGAAGCCACTAAGGATTATATTTTACAGGGATGGTGTAAGTGAAGGACAGTTTTACCAAGTTCTATTATACGAGTTGGATGCAATTCGGAAGGCATGTGCTTCTTTGGAGCCAAACTATCAACCTCCAGTAACTTTCATAGTTGTACAAAAAAGACATCATACTCGGTTATTTGCGAACAACCACAGGGACAGGAACAGTACAGATAGGAGTGGAAATATACTTCCTGGAACTGTTGTAGATACCAAAATCTGTCACCCAACAGAGTTTGATTTTTATCTCTGCAGTCACGCAGGCATCCAGGGTACAAGTCGGCCAGCACATTATCATGTTCTATGGGATGAAAACAACTTCACAGCAGATGGTATTCAATCTTTAACAAACAATCTCTGTTATACATACGCCAGATGTACACGCTCCGTATCTGTTGTTCCTCCAGCATATTATGCACATTTAGCAGCTTTTCGAGCCCGTTTCTACACGGAGCCAGACCTACAAGAGACCGGCTCCAATGGGGGCGGTCGAGGTTCCAAGACAACGCGTGCAGCCGGAGATTGTGGCGTAAAACCATTACCAGCCTTAAAGGAAAATGTGAAGAGAGTAATGTTTTATTGTTAG 2916 0.4218 MPLRQMKESSEQHLVIKPNLQNPMNQAKKVTRAVQNGKGPPPLTQEPHNQTSPQARTGGRRRSRVGGRKSDQGDVLMRPSCRPCTVVKNTENGNTVSSDVEMSFPTSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVLSKAVNRSIIAELVRLYKESDLGMRLPAYDGRKSLYTAGVLPFSWREFKIKLIEEEDAINGPKEYKVVIKFVARANLHHLGQFLAGKRADAPQEAIQILDIVLRELASKRFCPIGRSFFSPDIRAPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKDVLSRQLSDADRIKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIKHTHLPCLQVGGNQKKANYLPMEACKIVEGQRYTKRLNEKQITSLLKVTCQRPRDRENDILRTIQHNAYDQDPYAKEFGIKVSEKLATVEARILPAPWLKYHESGKEKNCLPQVGQWNMMNKKMINGMNVSRWACINFSRSVQDSVARTFCNELAQMCQVSGMEFNLDPVIPIYNAKPEQVEKALKHVYHVSSNKIKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLVDAVSCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQPQRQELIQDLYKTWHDPVRGVVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDRNSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYTEPDLQETGSNGGGRGSKTTRAAGDCGVKPLPALKENVKRVMFYC 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02634 971 Pfam Argonaute linker 2 domain 459 505 IPR032472 -
Car04g02634 971 ProSiteProfiles Piwi domain profile. 607 928 IPR003165 GO:0003676
Car04g02634 971 CDD Piwi_ago-like 477 927 IPR045246 -
Car04g02634 971 MobiDBLite consensus disorder prediction 1 79 - -
Car04g02634 971 Pfam N-terminal domain of argonaute 125 256 IPR032474 -
Car04g02634 971 Pfam Mid domain of argonaute 516 593 IPR032473 -
Car04g02634 971 Gene3D paz domain 311 437 - -
Car04g02634 971 CDD PAZ_argonaute_like 317 432 - -
Car04g02634 971 Gene3D - 497 670 - -
Car04g02634 971 SMART DUF1785_2 265 317 IPR014811 -
Car04g02634 971 SMART PAZ_2_a_3 322 455 IPR003100 GO:0005515
Car04g02634 971 Pfam Piwi domain 608 926 IPR003165 GO:0003676
Car04g02634 971 MobiDBLite consensus disorder prediction 42 58 - -
Car04g02634 971 Gene3D - 676 971 IPR036397 GO:0003676
Car04g02634 971 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 58 970 - -
Car04g02634 971 SUPERFAMILY Ribonuclease H-like 598 928 IPR012337 -
Car04g02634 971 Pfam Argonaute linker 1 domain 266 315 IPR014811 -
Car04g02634 971 PANTHER PROTEIN ARGONAUTE 10 58 970 - -
Car04g02634 971 SMART Piwi_a_2 607 928 IPR003165 GO:0003676
Car04g02634 971 Pfam PAZ domain 341 449 IPR003100 GO:0005515
Car04g02634 971 ProSiteProfiles PAZ domain profile. 318 433 IPR003100 GO:0005515
Car04g02634 971 MobiDBLite consensus disorder prediction 12 32 - -
Car04g02634 971 SUPERFAMILY PAZ domain 312 473 IPR036085 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02634 Car-Chr4 50423155 50430475 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02634 1 971 Eukaryotic Initiation Factors Gene Family AT5G43810 80.622 0.0 1637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02634 K11593 - gmx:100816999 1768.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02634 04 50423155 50430475 Car04g02634 04 50423155 50430475 ECH