Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02624 ATGTTTGATACTATGCATGTTTTGACAGTGATGGGAAAGAAAGGAAAATGGCTTAGGAATCTATTGACAGGGAAGAAAGACCACAAAGAAAAATGTGGAAGTGGAAATGAAAATCCAACAACTCCAACCTCTAGCACAACTCCAAAGGAGAAAAGAAGATGGAGTTTCAGAAGATCATCAGCTTCAAAGGAAATGAATGTTGCTGAATCAAGTGTTACTTCTTCTGTGACAGTGAAAGTTGGAATAGATTCTTGTGAGAATGATCATAGGAAGCATGTCATGGATGTCATTGCTGCTGATGGTGTGATCTTTCTGAATTCTTGTTCCAATGGTAGAACTAGAAGGAGTATTCAAAAGGCTGCTGCAATTAAAATTCAATCTGTCTTTAGATCCTACTTGGCAAGAAAGGCATTGTGTGCTCTTAGAGGAATAGTGAAGCTACAAGCACTAGTAAGGGGTCACTTGGTGAGAAAACAAGCAAATGAGACACTAAGATGCATGCAGGCTTTGGTTATAGCTCAAGCAAGAGCTTGTGCTCAAAGGGCTAGATTGTTATCATCAGAAGAAAAGACTAATCAAAAGCATTCAACCTACAGAAAATTCAAAGGGGACAATTTGTTCATACATATGTATAATGAAATGGACAGAGGTTTGGAAGAGAATATAAAGACAGTGGAGATGGATGTTTGTGAATCCAAAGGTAACTCAAGAGGAAGAAACAAAAGCACTTCAAATCATGCACATTGTGAATTGTATGAACATAGATTTTCTACATATTATTCACCAAATAGTTCATACTCAAAGAAAGAAAACTATGAAGTATTATCACCTTCACCATCAGCACTTACAGAACTGAGTCCAAGAGCAAGCAGTGGACATATTGAGGACTGTTCCTTCAGTACTGCACAGAACAGTCCTTATTACTACTCAACAGTGTCAAGAGTAGATAATGATTCAAAGCAACTTTCTTTTGCTTTCACTAGACAAGAAAATGAAGAGTCCATGTCTTATGATTATCCATTGTTTCCAAATTACATGGCTTATACAGAATCATCAAGAGCTAAAGTCAGATCACAGAGTGCACCGAAGCAAAGGCCGGACTCGTGTGAGAGGCAACCGAGCCGGAGAAGAGCTTCGGTGGAAGGACGTAATGTTCCGAGGCTAGTGAGGATGCAGAGATCGTCTTCACAAGTTGGTGTCGCGGCACAAAACTACCAGTATCCTCCATGGTCAATAAAGCTTGATAGGTCCTCAGTTTCACTCAATGACAGTGAGTGTGGCTCTACAAGTACAGCACTCACGAATTCTAACTACTGCAGATCTCTTGTTTCATATGATCCTCATGGACCAAGGTACTGA 1359 0.3966 MFDTMHVLTVMGKKGKWLRNLLTGKKDHKEKCGSGNENPTTPTSSTTPKEKRRWSFRRSSASKEMNVAESSVTSSVTVKVGIDSCENDHRKHVMDVIAADGVIFLNSCSNGRTRRSIQKAAAIKIQSVFRSYLARKALCALRGIVKLQALVRGHLVRKQANETLRCMQALVIAQARACAQRARLLSSEEKTNQKHSTYRKFKGDNLFIHMYNEMDRGLEENIKTVEMDVCESKGNSRGRNKSTSNHAHCELYEHRFSTYYSPNSSYSKKENYEVLSPSPSALTELSPRASSGHIEDCSFSTAQNSPYYYSTVSRVDNDSKQLSFAFTRQENEESMSYDYPLFPNYMAYTESSRAKVRSQSAPKQRPDSCERQPSRRRASVEGRNVPRLVRMQRSSSQVGVAAQNYQYPPWSIKLDRSSVSLNDSECGSTSTALTNSNYCRSLVSYDPHGPRY 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02624 452 MobiDBLite consensus disorder prediction 368 383 - -
Car04g02624 452 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 160 IPR027417 -
Car04g02624 452 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 11 429 - -
Car04g02624 452 ProSiteProfiles IQ motif profile. 118 146 IPR000048 GO:0005515
Car04g02624 452 Pfam Protein of unknown function (DUF4005) 305 384 IPR025064 -
Car04g02624 452 MobiDBLite consensus disorder prediction 354 384 - -
Car04g02624 452 MobiDBLite consensus disorder prediction 35 49 - -
Car04g02624 452 ProSiteProfiles IQ motif profile. 142 169 IPR000048 GO:0005515
Car04g02624 452 Gene3D - 116 171 - -
Car04g02624 452 MobiDBLite consensus disorder prediction 26 60 - -
Car04g02624 452 PANTHER IQ-DOMAIN 5-RELATED 11 429 - -
Car04g02624 452 Pfam IQ calmodulin-binding motif 142 159 IPR000048 GO:0005515
Car04g02624 452 Pfam IQ calmodulin-binding motif 120 138 IPR000048 GO:0005515
Car04g02624 452 SMART iq_5 140 161 IPR000048 GO:0005515
Car04g02624 452 SMART iq_5 117 139 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02624 Car-Chr4 50175935 50179481 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02624 10 442 IQD Protein Family AT4G14750 44.690 3.12e-94 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02624 - - gmx:100817667 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02624 04 50175935 50179481 Car04g02624 04 50175935 50179481 ECH