Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02623 ATGGCAGAAACAAAAGAAGGATCAAATACGGAGATGTCTTTGAAGGATCAAGGCAACGAGTTTTTCAAGTCAGGAAAATATCTCAAAGCTGCTGCACTCTACACTCAAGCTATAAAAAAAGACCCTTCAAATCCCACACTTTATAGTAACCGTGCTGCAGCATTGCTGCAATTGGATAAGCTTAACAAAGCTCTCGACGATGCTGAAATGACAATTAAATTAAAACCCCAATGGGAAAAGGGACATTTTCGGAAGGGGTGCATATTGGAGGCCATGAAACGATATGATGATGCTTTAGCTTCCTTTCAGATAGCTTCGCAGTATAACCCACAAAGTCAAGAAGTATCGAAGAAGATAAAGAAGATAAACCAACTCGTGAAAGATAGCAAGCGAGCTCAAGAAGTCGAGAATTTGAGATCGAATATTGACATGGCCAAACATTTAGATACATTCAAATCTGAAATGGTTAGTGCAATTGTTCTGACCATGGAGACTGCTGTAAAATCATGGCATGGAACTTCTTCAGTGGATGCTAGAGTTTACTTTCTTCCTGATAAGGAAAAGACGCAAACTGATAAGTATCCCCCAATTGTGAATATTGATAAGGCCTTTGAATCACCACAAACACACAGCAGCTGTTTTTCATTTCTTCGGCAGTATGCCGAGGAGTCTTTCTCCAAAGCAGCATGCTTAGTGGCTGCGAAAAACATCATTGCTTATCCACAGGTCTGGAAAGGACAAGGATCAAGGAAATGGAAACATGCACAGAATGATGGTTTTTTTGTTCAATTTGAGTCTCCTTCCCTGCGAAAATTGTGGTTTATTTCCAGTTCGAATGAAAAGGGACAGACACTGTGCAGGGAGCCAGAAGTTTTGGACATTGGTGCTCATGAAGTTGTTCCTCGCCTGTTCAAAGAAAAGACGTCTCGTGCTTAA 936 0.4081 MAETKEGSNTEMSLKDQGNEFFKSGKYLKAAALYTQAIKKDPSNPTLYSNRAAALLQLDKLNKALDDAEMTIKLKPQWEKGHFRKGCILEAMKRYDDALASFQIASQYNPQSQEVSKKIKKINQLVKDSKRAQEVENLRSNIDMAKHLDTFKSEMVSAIVLTMETAVKSWHGTSSVDARVYFLPDKEKTQTDKYPPIVNIDKAFESPQTHSSCFSFLRQYAEESFSKAACLVAAKNIIAYPQVWKGQGSRKWKHAQNDGFFVQFESPSLRKLWFISSSNEKGQTLCREPEVLDIGAHEVVPRLFKEKTSRA 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02623 311 ProSiteProfiles TPR repeat profile. 11 44 IPR019734 GO:0005515
Car04g02623 311 PANTHER STRESS-INDUCED-PHOSPHOPROTEIN 1 13 307 - -
Car04g02623 311 Coils Coil 51 71 - -
Car04g02623 311 Gene3D Tetratricopeptide repeat domain 3 157 IPR011990 GO:0005515
Car04g02623 311 SMART tpr_5 79 112 IPR019734 GO:0005515
Car04g02623 311 SMART tpr_5 45 78 IPR019734 GO:0005515
Car04g02623 311 SMART tpr_5 11 44 IPR019734 GO:0005515
Car04g02623 311 PANTHER TPR REPEAT CONTAINING PROTEIN 13 307 IPR045248 GO:0006457|GO:0030544|GO:0051879
Car04g02623 311 Pfam TPR repeat 18 58 - -
Car04g02623 311 SUPERFAMILY TPR-like 13 122 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02623 14 105 U-box Gene Family AT3G07370 29.348 7.72e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02623 - - gmx:100790717 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02623 04 50169265 50175139 Car04g02623 04 50169265 50175139 ECH