Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02620 ATGGGAATTAGAGATTTTCATATCAAAGTCAAGGCACTCAGGCTCTCATGTTTAGGAAATAGAGGCAGAAGAAGTTTTCATGGGGTTGCAAACAAACCTTCATGGATGGTGCCAATAACACATGGTCATCATGTGGTGGAGCATGATGTGATTAAAGGTGGTTCTGATGACTCTGAGTTTGATTCAGTTGTTATACAAAGGGAGCAAATTGGTGACACTGAATTGTGGTATTTTGGAATCTTTGATGCTTTGATTGGAGATGGTGTTACCAAATATTTGCAATCCAATTTTTTTTACAAGAATCTCAAAGAGTCCCATTTGAGGAGAAAAACCAAAGAAACACTCAAGAGAGCTTACCTAGGTGCAAGAACAAAGGCCAGAGAAGCACAGAAATCAGAGGAGAAATGCATAATAGGTTCAACATCTGTGATGGTGATAAATGGAGAAAAACTTGTGATGGCCAACATGGGAGATTACAGAACTGTTTTGTGTAGAGATGGTGTAGCTTATCAAACAACTGGAAGATACAATCAATCATCAAAGAGACATTGGTTTCGCAGACTCTTTTCAGGTACAAAGCGTTCTAAAGCTTCAGAACTTGTGGTGGGAGGTGATTGGATTGACTCTTATACTGAATTTGTGATCTTAGCAAGCAATGGCATATGGGAGGTGATGAAAAACCAAGAGGCAGTGAATCTTATTAGACACATAGAGGATCCACAAGAAGCAGCTGAGTGTTTGGCTAAGGAAGCATTGGTTAGGATGAGCAGAAGCAACATTTCATGTTTAGTCATTCGGTTCGATTGA 807 0.3953 MGIRDFHIKVKALRLSCLGNRGRRSFHGVANKPSWMVPITHGHHVVEHDVIKGGSDDSEFDSVVIQREQIGDTELWYFGIFDALIGDGVTKYLQSNFFYKNLKESHLRRKTKETLKRAYLGARTKAREAQKSEEKCIIGSTSVMVINGEKLVMANMGDYRTVLCRDGVAYQTTGRYNQSSKRHWFRRLFSGTKRSKASELVVGGDWIDSYTEFVILASNGIWEVMKNQEAVNLIRHIEDPQEAAECLAKEALVRMSRSNISCLVIRFD 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02620 268 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 44-RELATED 7 267 - -
Car04g02620 268 SUPERFAMILY PP2C-like 62 268 IPR036457 -
Car04g02620 268 Gene3D - 197 268 IPR036457 -
Car04g02620 268 Gene3D - 47 188 IPR036457 -
Car04g02620 268 SMART PP2C_4 37 265 IPR001932 -
Car04g02620 268 PANTHER ALPHABET, ISOFORM E-RELATED 7 267 - -
Car04g02620 268 Pfam Protein phosphatase 2C 208 260 IPR001932 -
Car04g02620 268 Pfam Protein phosphatase 2C 74 172 IPR001932 -
Car04g02620 268 CDD PP2Cc 61 267 IPR001932 -
Car04g02620 268 ProSiteProfiles PPM-type phosphatase domain profile. 57 267 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02620 Car-Chr4 50133039 50136300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02620 1 267 PP2C-type Phosphatase Gene Family AT3G23360 43.929 2.45e-70 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02620 K19704 - gmx:100794054 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02620 04 50133039 50136300 Car04g02620 04 50133039 50136300 ECH