Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02602 ATGGATCTTGTTGTTGGTGGAAAATTTAAGCTTGGGAGGAAAATTGGGAGTGGATCATTTGGCGAGCTTTATTTAGGTGTTAATGTTCAAACTGAAGAGGAAGTGGCTGTTAAGCTGGAATCTGTGAAGACAAAGCATCCTCAACTTCTCTATGAGTCCAAATTGTATATGCTTCTTCAAGGAGGAACCGGCATACCTCATATAAAGTGGTCTGGAGTGGAGGGTGACTACAATGTCATGGCTATTGACCTTCTTGGACCAAGCCTTGAAGACTTGTTTAACTATTGCAGTAGAAAATTCTCTCTGAAAACAGTGTTGATGCTTGCAGATCAACTAATAAACAGAGTAGAGTATATGCACTCCCGGGGCTTTCTGCATCGTGATATAAAGCCCGACAACTTTTTAATGGGTTTAGGCCGCAAGGCAAATCAGGTTTACATTATTGACTATGGCCTTGCGAAAAAGTATCGTGATCTTCAAACACATAAGCATATACCATACAGGGAAAATAAGAATCTCACCGGAACCGCTCGATATGCAAGTGTTAACACTCACCTTGGAGTTGAACAAAGCAGAAGAGATGATCTTGAATCGCTTGGTTATGTACTAATGTACTTTTTGAGAGGAAGTCTTCCATGGCAAGGCTTGAAAGCTGGCACTAAAAAGCAGAAATACGACAAGATAAGTGAAAAGAAGATGCTTACTCCAATAGAGGTCTTGTGCAAGTCACATCCAACAGAATTCACATCATATTTCCACTATTGCCGATCGTTGCGGTTTGAAGATAAACCCGATTATTCATATCTTAAGAGACTCTTCCGAGACCTTTTCATTAGAGAAGGTTATCAGTTTGACTATGTATTTGATTGGACTATATTGAAGTATCCTCAAATAGGATCCAGTTCTAGAACACGGCCAAGTGTGAAACCAGTCTTAAACCCAGGACCATCTGGAGAGAGATTAGAACGACCTTCAGGTTTATTCCTATTGCAAGATCTGGAATCTGTTTCATTCTGA 1017 0.4022 MDLVVGGKFKLGRKIGSGSFGELYLGVNVQTEEEVAVKLESVKTKHPQLLYESKLYMLLQGGTGIPHIKWSGVEGDYNVMAIDLLGPSLEDLFNYCSRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPIEVLCKSHPTEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRTRPSVKPVLNPGPSGERLERPSGLFLLQDLESVSF 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02602 338 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Car04g02602 338 PANTHER CASEIN KINASE-RELATED 1 306 - -
Car04g02602 338 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Car04g02602 338 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02602 338 Pfam Protein kinase domain 10 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02602 338 Gene3D Transferase(Phosphotransferase) domain 1 1 313 - -
Car04g02602 338 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Car04g02602 338 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02602 338 MobiDBLite consensus disorder prediction 300 322 - -
Car04g02602 338 CDD STKc_CK1_delta_epsilon 8 282 - -
Car04g02602 338 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02602 Car-Chr4 49634965 49641160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02602 11 281 MAP Kinase Kinase Kinase AT1G62400 26.056 2.37e-12 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Car04g02602 Pkinase 4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02602 K08960 - gmx:100790721 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02602 04 49634965 49641160 Car04g02602 04 49634965 49641160 ECH