Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02593 ATGACAGACAACATACCTGAGCCATCTTCAGTCTCCCCAAATTCCAAGAAAGAATCCTTAGAAAATATTTCTATGAGATTTTCCACACTCTCAAATAGCTCATCTGTAATGGTGGGAGTTAAGAGAGGATACATGATCTCTCACACTaacacaacaacaaccaccaacaacagcaacaacaaGTTGATGATGCAATCACCAGAAGCAAGCATGTATACCAATCCCCCTGAAGATACAAATGGAGACTTCACAACATCATCCAGCAAGAAAAACAAAGGTAGACCATTGGGATCCAAGAATAGACCCAAACCACCTATTGTTATAAAGGAAAACACAGATACACTTATGGAACCAATTCTAATTGAAATTTCTGCTGGAAAAGATGTTGTAGAAACTCTCATCAACTTTGCTCATTGTCGTCAATCTAGCATCACAGTTTTAAGTGGTATTGGTCCTGTCTCTGATGTTACTCTTCTCAATCCACTCTCTCGTGCTCCTACTTTTCCCATGAAAGGATTGTTCAATATGTTATCTCTTTCTGGTACTTACGTCAATGCCAATTGTGGTCATCATGTTCCTCCACGTTTCATCACTGAACCAACATGTTCTTCTTTTTCCATTTACCTCTCTGGTGATAGTGGACAGGTTTTTGGTGGTATCATTGGAGGCATGGTAAAGGCTGTTGGTGATGTTTTGATTTCAGCTGCACTTTTCAAGAAACCTGAGTTTCAAAGATTGACCATTATCAATGGAAGTGTTCATGAAATTGAAGAGAATAATGACTTACATGTTGGTGATTCAGATTTCAGTGTTGCACCTGCCAATTCAACTCAATTGAATTCTTCATTCTTTCCTCTTCCTTTTTCTAGTACTGATGTTAATGTCATACAGTGGAACCACTCTACCCATTGA 912 0.3717 MTDNIPEPSSVSPNSKKESLENISMRFSTLSNSSSVMVGVKRGYMISHTNTTTTTNNSNNKLMMQSPEASMYTNPPEDTNGDFTTSSSKKNKGRPLGSKNRPKPPIVIKENTDTLMEPILIEISAGKDVVETLINFAHCRQSSITVLSGIGPVSDVTLLNPLSRAPTFPMKGLFNMLSLSGTYVNANCGHHVPPRFITEPTCSSFSIYLSGDSGQVFGGIIGGMVKAVGDVLISAALFKKPEFQRLTIINGSVHEIEENNDLHVGDSDFSVAPANSTQLNSSFFPLPFSSTDVNVIQWNHSTH 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02593 303 ProSiteProfiles PPC domain profile profile. 113 259 IPR005175 -
Car04g02593 303 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 47 300 - -
Car04g02593 303 Pfam Plants and Prokaryotes Conserved (PCC) domain 118 238 IPR005175 -
Car04g02593 303 MobiDBLite consensus disorder prediction 68 106 - -
Car04g02593 303 Gene3D - 117 260 - -
Car04g02593 303 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 47 300 IPR014476 GO:0003680
Car04g02593 303 SUPERFAMILY AF0104/ALDC/Ptd012-like 116 246 - -
Car04g02593 303 MobiDBLite consensus disorder prediction 68 93 - -
Car04g02593 303 CDD DUF296 118 233 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02593 Car-Chr4 49339572 49340483 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02593 89 246 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 39.264 2.98e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02593 - - cam:101509190 589.341