Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car04g02588 | ATGGTTAGAGCTCCTTGTTGTGAAAAAAAGGGATTGAAGAAGGGTCCTTGGACCCAAGAAGAAGATGAAATTCTCATTTCCTACATACAAAAACATGGACATAGCAATTGGCGTGCCCTCCCCAAACATGCCGGTTTATTAAGATGTGGAAAGAGTTGCAGACTTAGATGGATTAATTATTTAAGACCAGATATTAAGAGAGGAAATTTTACAAATGAAGAAGAGGAAATTATCATTAAGATGCATGAGTTGCTAGGGAACAGGTGGTCAGTAATAGCTGCAAAGTTACCTGGAAGAACAGATAATGAAATAAAAAATGTGTGGCACACTCACTTGAAGAAGAAACTACTCAAAACCAATAGTCAACAAAATTCAAATACCATAAAAAGAGTTTCAAAACCAAAAATCAATAGAACCAATTCCAATTCAAGTACTTTAACTCAATCTTCTTCAGAACCTTCTAATTATTTCCTTGAAATGGAAACTACATCATCAATTTGCACTTTTTCTAGTGATTTTTCATCACAAGGTAAATTTATGGACAACAACATTAATTGTGAAGAGCCTAAGCCTGAAATTGATGAAAGTTTTTGGTCAGAGACAGTAACTGATGATGAAATTAGTTCCACCATGCTAACAAATTCTTGGACAGTTTCAAATGAATTGCCAAATCAACAATACCCTGTAGTGGAAACTTTCCAAAATCAAGAGAAGTATAATGGTTTTAGTTCAAATTCCTTTGATGATGATGATGGAATGGATTTTTGGTATGATTTGTTTATCAGATCAGGAGAATCAACAGATTTGCCAGAGTTCTAG | 819 | 0.3419 | MVRAPCCEKKGLKKGPWTQEEDEILISYIQKHGHSNWRALPKHAGLLRCGKSCRLRWINYLRPDIKRGNFTNEEEEIIIKMHELLGNRWSVIAAKLPGRTDNEIKNVWHTHLKKKLLKTNSQQNSNTIKRVSKPKINRTNSNSSTLTQSSSEPSNYFLEMETTSSICTFSSDFSSQGKFMDNNINCEEPKPEIDESFWSETVTDDEISSTMLTNSWTVSNELPNQQYPVVETFQNQEKYNGFSSNSFDDDDGMDFWYDLFIRSGESTDLPEF | 272 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car04g02588 | 272 | CDD | SANT | 69 | 112 | IPR001005 | - | |
Car04g02588 | 272 | CDD | SANT | 16 | 61 | IPR001005 | - | |
Car04g02588 | 272 | Gene3D | - | 13 | 66 | - | - | |
Car04g02588 | 272 | Pfam | Myb-like DNA-binding domain | 14 | 61 | IPR001005 | - | |
Car04g02588 | 272 | Pfam | Myb-like DNA-binding domain | 67 | 112 | IPR001005 | - | |
Car04g02588 | 272 | SMART | sant | 66 | 114 | IPR001005 | - | |
Car04g02588 | 272 | SMART | sant | 13 | 63 | IPR001005 | - | |
Car04g02588 | 272 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 1 | 264 | - | - | |
Car04g02588 | 272 | PANTHER | MYB-RELATED TRANSCRIPTION FACTOR LBM1 | 1 | 264 | - | - | |
Car04g02588 | 272 | MobiDBLite | consensus disorder prediction | 133 | 153 | - | - | |
Car04g02588 | 272 | SUPERFAMILY | Homeodomain-like | 11 | 108 | IPR009057 | - | |
Car04g02588 | 272 | ProSiteProfiles | Myb-like domain profile. | 62 | 112 | IPR001005 | - | |
Car04g02588 | 272 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 62 | 116 | IPR017930 | - | |
Car04g02588 | 272 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 61 | IPR017930 | - | |
Car04g02588 | 272 | ProSiteProfiles | Myb-like domain profile. | 9 | 61 | IPR001005 | - | |
Car04g02588 | 272 | Gene3D | - | 68 | 152 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car04g02588 | Car-Chr4 | 49220831 | 49223026 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car04g02588 | 1 | 272 | MYB Transcription Factor Family | AT2G31180 | 49.818 | 4.85e-80 | 240 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Car04g02588 | Myb_DNA-binding | 3.6e-16 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car04g02588 | K09422 | - | gmx:100806975 | 331.643 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Car04g02588 | 04 | 49220831 | 49223026 | Car04g02588 | 04 | 49220831 | 49223026 | ECH | |
Car03g02323 | 03 | 69184112 | 69186701 | Car04g02588 | 04 | 49220831 | 49223026 | PCT |