Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02575 ATGTTGTTAGGTCATCAGGTAGGATTGCCTGGGGTGGATCATCATCCCCACCCATCAGGCAATCCACCTGGTATAAACAACAAACGCCACCACACCGAACTCTCAATCCACGAAACACGAAAAATTgaagaagatgaagatgaagaagatgaaagagacatcgacgacgaaccaaaagaagGCGCAGTCGAAATCGGAAACCGAAGACCAAGAGGAAGACCACCCGGTTCAAAAAACAAACCAAAACCACCAATCTTCGTAACAAGAGACAGTCCAAACTCATTAAAAAGCCATGTGATGGAGGTAGCCGGAGGAGCGGACGTAGCCGAAAGCGTAGCCCAGTTTGCGAGACGGCGACAACGAGGCGTCTGCGTCTTAAGTGGAAGCGGCTCGGTTGCCAATGTCACCCTAAGACAACCAGCAGTACCAGGTGCTGTTGTAGCACTTCATGGAAGATTTGAGATTCTATCATTAACAGGTGCATTTCTACCTGGTCCTGCTCCTCCAGGTGCTACAGGACTCACAGTTTACTTATCTGGTGGACAAGGTCAAGTTGTTGGTGGAAGTGTTGTTGGATCTTTGATTGCTGCTGGTCCTGTTATGGTTATTGCTGCTACTTTTGCTAATGCTACTTATGAAAGATTACCACTTgaggaagaagaagaagaagaCGTCggcggtggaggtggtggtggtggaattagtgctgtccatggaggacatgttggagttggaggtggtAATTCATCTCCTTCACATGGAATTGGAAGCAGTGGAGGTGGTGGTGGGGTCCACATGCAGGGTGGACTTCCAGATCCATCTTCTTTGCCTTTGTATAATTTGCCAACAAATCTTGTTCACAATGGTGGTCAGGTGGGAGGTGGACATCATGAAGCTTTTGCTAGTTGGCCTCATGGAAGGCAACCTTATTGA 933 0.4051 MLLGHQVGLPGVDHHPHPSGNPPGINNKRHHTELSIHETRKIEEDEDEEDERDIDDEPKEGAVEIGNRRPRGRPPGSKNKPKPPIFVTRDSPNSLKSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAVPGAVVALHGRFEILSLTGAFLPGPAPPGATGLTVYLSGGQGQVVGGSVVGSLIAAGPVMVIAATFANATYERLPLEEEEEEDVGGGGGGGGISAVHGGHVGVGGGNSSPSHGIGSSGGGGGVHMQGGLPDPSSLPLYNLPTNLVHNGGQVGGGHHEAFASWPHGRQPY 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02575 310 PIRSF ESCAROLA 13 310 IPR014476 GO:0003680
Car04g02575 310 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 6 310 - -
Car04g02575 310 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 6 310 IPR014476 GO:0003680
Car04g02575 310 MobiDBLite consensus disorder prediction 218 275 - -
Car04g02575 310 MobiDBLite consensus disorder prediction 43 57 - -
Car04g02575 310 SUPERFAMILY AF0104/ALDC/Ptd012-like 92 221 - -
Car04g02575 310 Pfam Plants and Prokaryotes Conserved (PCC) domain 97 208 IPR005175 -
Car04g02575 310 Gene3D - 96 224 - -
Car04g02575 310 CDD DUF296 96 178 IPR005175 -
Car04g02575 310 ProSiteProfiles PPC domain profile profile. 92 228 IPR005175 -
Car04g02575 310 MobiDBLite consensus disorder prediction 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02575 Car-Chr4 48760044 48761415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02575 5 310 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 57.605 8.04e-92 273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02575 04 48760044 48761415 Car04g02575 04 48760044 48761415 ECH