Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02573 ATGGCAAGGTCAAAAACCACATCAAGTGAAGAAAGTGATGAGCAAGAAGTTCAAACCAAGAGATCTTATGATTGCACATTTTGCAAAAGAGGTTTCACTAATGCAAGGGCATTAGGAGGCCACATGAATATTCATAGAAAAGAGAGAACAAATTATGAGGCCAATCAAACCACACACAATTTCATGTGCTCATCATCTTTTGTTCCTATTGTTTCAAGGCAACCCTCAACATATTATTGCCTTTTGGAGCCTACTAGGAACTATGACATGTATATTCATCCATCAACAACAAACCCTAGAAACCCTTCTCCTGACTTTCAATATGATTTTCTTAACACAAGCACCGAGTCTTTGATGGAAACCAATTTGAGCCTCCAAATTGGTTCAAGTAATGAGTGTAATGATCAAGTTTGGAGAGGAACTGAGAAAGATGGTGAAGGGGTGAACCTAGAGCTTAGGCTTGGTCATAGTTCATACTCAAACTACTAA 489 0.3845 MARSKTTSSEESDEQEVQTKRSYDCTFCKRGFTNARALGGHMNIHRKERTNYEANQTTHNFMCSSSFVPIVSRQPSTYYCLLEPTRNYDMYIHPSTTNPRNPSPDFQYDFLNTSTESLMETNLSLQIGSSNECNDQVWRGTEKDGEGVNLELRLGHSSYSNY 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02573 162 SUPERFAMILY beta-beta-alpha zinc fingers 20 50 IPR036236 -
Car04g02573 162 ProSitePatterns Zinc finger C2H2 type domain signature. 25 45 IPR013087 -
Car04g02573 162 PANTHER OS07G0101800 PROTEIN 4 158 - -
Car04g02573 162 Gene3D Classic Zinc Finger 2 69 - -
Car04g02573 162 ProSiteProfiles Zinc finger C2H2 type domain profile. 23 50 IPR013087 -
Car04g02573 162 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 4 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02573 Car-Chr4 48641203 48641691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02573 18 135 C2H2 Transcription Factor Family AT3G23140 35.294 7.40e-14 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car04g02573 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02573 - - mtr:MTR_1g044225 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02573 04 48641203 48641691 Car04g02573 04 48641203 48641691 ECH