Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02524 ATGACTAATGTTACCAAGGAGTACCCTGATTTCTTCAAAGTCTTCCTTCTAGAAAAGCACTATGAGAGAATGCAAATTCCAGATGCTTTTGTGAATTTGATGTGTTTGAAAACAAGATTAATGAAGGATGTTACACTGAGAGATCATAGAGGAAGAGAATGGCATGTCAAAACGCGTTCTGTTGGTGCAAAACTTTATTTTGCTGATGGTTGGAAGAGATTTAGAGAACAAAATTGTTTAGAAGAGAGTGATTTCATTGTTTTCACACATGTTGAAAACAATGTGTTCAAGTTTAAAATCCTTGAATTGGCATCAATGTGTGAGAAGATTAAGGTAATGGAAGTGGACAACAATGTGATGGAGGAGGAAgatgatggtgatgctaatggtgatgatgatgatgatgatgatgattatgatgatgataatgatgatgatgatgatgatgtgatgatgatagaacatgatgatgatgatgatCCAGAAGAAGAGATAGAAGCTGTGAAGGGAAACATTAGAAATCAACCTCAACATTTGAGAACATGCAAAGCTAGGGACATTGAGAGCAGTTCTAAACATTCAAAACATGAAGATGATGAATTTGATGCTGAAATATATGTTCAGGAAGGAAATCCATATTTTGTTGTAAAACAATCTCATAACCGACCCAATGAAATATCTATTCCAAAAAACACAATTAAGGACTTTTGCCTTTGCTTTACAAAACATATCCCACTTGTATGTTGCCATTGCAAGGGTGTTCAAAAAAGAGATATTGAGGCCTATCATTTCGTCTTGCCACAAATTAGCACAGAACACATCAAAAAGAGAGGTGAAATACGTAGATGGAAAGATGGTCGGGTACTTGTGCAAGGGTGGGAAGGTTTTTGTAGAAAGAGCAAGATCAAAGAGAATGATAGATGCATATGTGAGCTCGTGTTGCGTGAAGACAAAACAATCGAAATGTTAAGAGTGCATGTAATTAGGAGGAAATGA 996 0.3233 MTNVTKEYPDFFKVFLLEKHYERMQIPDAFVNLMCLKTRLMKDVTLRDHRGREWHVKTRSVGAKLYFADGWKRFREQNCLEESDFIVFTHVENNVFKFKILELASMCEKIKVMEVDNNVMEEEDDGDANGDDDDDDDDYDDDNDDDDDDVMMIEHDDDDDPEEEIEAVKGNIRNQPQHLRTCKARDIESSSKHSKHEDDEFDAEIYVQEGNPYFVVKQSHNRPNEISIPKNTIKDFCLCFTKHIPLVCCHCKGVQKRDIEAYHFVLPQISTEHIKKRGEIRRWKDGRVLVQGWEGFCRKSKIKENDRCICELVLREDKTIEMLRVHVIRRK 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02524 331 MobiDBLite consensus disorder prediction 179 199 - -
Car04g02524 331 Pfam B3 DNA binding domain 11 100 IPR003340 GO:0003677
Car04g02524 331 ProSiteProfiles B3 DNA-binding domain profile. 9 104 IPR003340 GO:0003677
Car04g02524 331 SMART B3_2 11 104 IPR003340 GO:0003677
Car04g02524 331 MobiDBLite consensus disorder prediction 120 162 - -
Car04g02524 331 CDD B3_DNA 9 101 IPR003340 GO:0003677
Car04g02524 331 Gene3D - 193 331 IPR015300 -
Car04g02524 331 SUPERFAMILY DNA-binding pseudobarrel domain 7 102 IPR015300 -
Car04g02524 331 Gene3D - 2 107 IPR015300 -
Car04g02524 331 PANTHER B3 DOMAIN-CONTAINING 4 330 - -
Car04g02524 331 SUPERFAMILY DNA-binding pseudobarrel domain 225 329 IPR015300 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02524 9 329 B3 DNA Binding Superfamily AT3G06160 22.936 5.23e-20 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Car04g02524 B3 1.7e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02524 - - mtr:MTR_1g046320 385.185