Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02518 ATGATCCGTGTTCAAGGGGGTAATGTGAAGTGGAGAGATCTTAGATTGGATACCGGTAACTTCTCAAGGGGCAGTGAAGTAGTAACTCGCAAGACTCGTCTTCTGGATGTGGTTGATGCTGCACCATTCAAGCAATGGTACCTTCAGCACTATGGTGTTGAAATTGGTAGCAAAAATAAATCAGCAGCAACCAAGAAGGATTCTATAGAGGAGGTTGAAGCCGCTGCTGAAGAAGCCAAGAAAAGTAATCATGTGCAGAGGAAACTTGAGAACCGTCAAAAAGATCGTCAGCTAGATTCCCACACTGAAGAGCAGTTTGGTGGTGGTCGTTTGTTGGCCTGTATTTCATCTCGTCCAGGTCAATGTGGCAGGGTTGATGGATACATCCTCGAAGGTAAGGAATTGAAATTTTACATGAAGAAGTTACAGAGGAAGAAGGGAAATGGTGCTTCTTAA 456 0.4408 MIRVQGGNVKWRDLRLDTGNFSRGSEVVTRKTRLLDVVDAAPFKQWYLQHYGVEIGSKNKSAATKKDSIEEVEAAAEEAKKSNHVQRKLENRQKDRQLDSHTEEQFGGGRLLACISSRPGQCGRVDGYILEGKELKFYMKKLQRKKGNGAS 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02518 151 Pfam Ribosomal protein S8e 2 130 IPR022309 -
Car04g02518 151 PANTHER 40S RIBOSOMAL PROTEIN S8 38 150 IPR001047 GO:0003735|GO:0005840|GO:0006412
Car04g02518 151 PANTHER 40S RIBOSOMAL PROTEIN S8 2 38 IPR001047 GO:0003735|GO:0005840|GO:0006412
Car04g02518 151 Gene3D Ribosomal protein S8e, subdomain 46 109 IPR042563 -
Car04g02518 151 PANTHER 40S RIBOSOMAL PROTEIN S8 2 38 - -
Car04g02518 151 Gene3D - 1 45 - -
Car04g02518 151 MobiDBLite consensus disorder prediction 74 103 - -
Car04g02518 151 Coils Coil 62 92 - -
Car04g02518 151 PANTHER 40S RIBOSOMAL PROTEIN S8 38 150 - -
Car04g02518 151 MobiDBLite consensus disorder prediction 74 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02518 Car-Chr4 46425091 46426040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02518 2 139 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 64.375 4.18e-65 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02518 K02995 - gmx:100500112 241.506