Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02509 ATGGATATTAACAAAAGAAGCTCAAACAAGGCTTGTGCATCTTGCAAATTTCAAAGAAGAAAGTGTTCTAAAGATTGTCCTTTAGCTCCTTATTTTCCAGCCAATAAACCAAAAACTTTTAGCAATGCTCATCGTTTGTATGGTGTTTCCAGCATTTCAAAATTACTAAAACGCATAAACAATGATAAAAAAGATGAAGCAATGACGTCAATTATTTATGAGTCCAATATTCGTTCTATGTTTCCAATTTATGGATGTACCGGTGTTATTAATATTCTTCAAGGTAAGTTACATAATGCCAGTTGCCAAATTCCAAATGATCCAATATGTAACAATATTGGTGATCGATCTTATTTTTACGACAATAGTGAAAATAATAATTTTATGCTTAGTCATATCATCCCTAATGATGTTAACAATATTACTTCCATTGATTCAAAAAATGAGTTGGAAGTGAATGTTGAAACGGGAGTGAGTGGTGTATTTAGCAATGGTGCTGACATTCAACTCATGGAGGAAAATTCTAATTTGATGGCAACACAAGGAGATTTGGAACATAATTATTTTGGTGTCGATGTCCAAAGTGCATATGATGATTATGATACAGAATTGAGTAGGTTGTTTCATGGTGAACAACATCCACCAATTACGCCAAAGGATGCACCTAAATCGTCCAGTGTGGGGTCAGGTGAACAAGAACTTGATAAAAATAGCAAGCATGGGGACAAATGA 732 0.3402 MDINKRSSNKACASCKFQRRKCSKDCPLAPYFPANKPKTFSNAHRLYGVSSISKLLKRINNDKKDEAMTSIIYESNIRSMFPIYGCTGVINILQGKLHNASCQIPNDPICNNIGDRSYFYDNSENNNFMLSHIIPNDVNNITSIDSKNELEVNVETGVSGVFSNGADIQLMEENSNLMATQGDLEHNYFGVDVQSAYDDYDTELSRLFHGEQHPPITPKDAPKSSSVGSGEQELDKNSKHGDK 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02509 243 MobiDBLite consensus disorder prediction 209 243 - -
Car04g02509 243 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 7 104 - -
Car04g02509 243 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Car04g02509 243 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 104 - -
Car04g02509 243 Pfam Lateral organ boundaries (LOB) domain 11 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02509 Car-Chr4 46155752 46157684 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02509 5 94 AS2 family AT3G47870 54.444 4.10e-33 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car04g02509 LOB 4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02509 - - cam:101493950 483.796