Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02479 ATGGGAAAGAGAATTAGGGATAAAGAGGGTGCAATATCTAATGGAATCAATAGTCATCAAAGTCATGAAACTCATCCAGGAAGAGTATGGGGAATTCTTCATATTATAAAGTATCATCATTGGCGTCATGTCAAGAGAAGGCTTACACATAGAAGGCATAGTGGTGGAAGTCCTGAAGCAAGAGATGAAATTCCAGGAACTTCTGATGATTCTGGGGTTGATAACATGGCAGTAGTTTTAAAGCCAAATACAAATTTACCTAATGTTGAAGAAAAGATGGTACAGTCCACTCCACATGAAAAACAATCTATAAAATCAAAAATAAAAGCACTTCTTAATGAGGATAAATACAAAAAGAAGGGTAGACACAAGAGAAGCTCAACCTGCCCAACAAAATCACAGCTAACTCGCGTAAATTCAGTTCACCACTTAGAGGTTGATCCACTTAGTGAGATGTTGTTAACAGTTGAGAATCCTGAACCAGTTATTGAAACTTTTCAAAACCACCTCGCCGCAGGCACATTGGATGTGTTGTCACCTGTTTTCTCAGGGAGGAAACCGATCAGTTACAATGACAAATGTGTCGAGTGTGGTGAAATGTTTTCTAGTGAGTCTTTGGAAGATGAAAAGATTCATAAGCATCATAGTTCATGGACTGATACAAAAAACTTGAGTTCTTCTAGTGAAAGTTTACCAGAAGAAAAGTTGATGAATGCCAAAATATTTACAACCGATGCTTCACCGCATCTTTTCAAGGATTTTCTTGATGCTCTTGATGTGATAAACACAAACAAGGACTTTCTATTGAAATATATAAATGATCCTGGTTCTCCTTTGCCATTCCAAATTCATAATCAACAACACTCTCTCAATAGTAAATCGAGACGAGCCAACTCGATCTCGTTACCTGTTTGTGGTTCATCATCAGGAACCAAAGATTCTGAGATAGGACAAGAGATAAACCAAATGGTAGATGATTTTTTCATTACAAAAGGGGAGATACAGTCACAAACTCCAAATGTATCCATGTTTGAGCCTTTAGGAGATTTTTACAAACCATCAACTTCTTCATTACATAAAGTTGATCAAGAATTGGTTGAAAGAGACCGTAACATTTCATCAGAATCATCCCAGGTAGCCAACAGTGTAAAGACTAAAAACTTCAAGGATCTTAGAAAGAAAATAAAACATATAATCGAAGAAAGCAAAAATGAAAAGCGTCGCATTTCCATGGATGGTATAATTGACAAAATTCCTCGCGGAAACAAATTTGCCAAAAATGTAAGGAAGTTGATCCATGAACAATCTAAAGTACCTAATGGAGAAGGAAAAGACAGTGGCAGCACAAGCGGTTACCGTAATCGCCTTTCGTCTTACTGGAACAATAAGAGACAACTATCAAGTATGAGGACTTCATCACTAAAAGAATCAGTTAATAGATATTCTCAGCTTTATGAGACTTGTTGTCACAATGAAGTTAGCAATGAAGTCAAGCACCCTAAGACTGAGAGCTTAAGATTGAAAACAGATGATAGATGTTCAATAATAAAGACACCAAAATCCATTAAAAGGTTTCTCTCATTGCCTAATATAAAATCTCACTTCAACCAAATTGAGGAACCTTCTGTTCTTTTATCTCCTCAAAATTCAATTAGAAAACCAGAAGATAGAACCATAAACAAAAGTATAACTGATCAGAAAATTCTGTCACCTACACTTTCTGATCATGAAAATGAAGAAAGCATTTTGAATGATGACCAAAAAGAAGCTCTTGTTAGGAGTGTTTCCGAATCAGAATCAGATGTTAATGATGAGATAAAAACAGAAAATAGCATAGGATTTGATGATTTAGAAAACTTGAGAGACAACGAATGTGGTGCTTACAATGAACAGGACATTGGATATACAACAGAATCTAGTACATTGTTGGTTGAAGCAAACTCAGCCTTCTCTTCTGACACAAGCTTCTTAGATTGTACATTTGAGTTGGAAAACTTAAATGTATTGGAAGAATCAGATCAAGAATTGAAGCTAGATCCATCTTATTATGAATTCAATACTATGATTGAGAAACAAGAGCCTAAACTGGACCACTCTGAGATAATTGATATTGGAGAGAGTTTTCTGAAATTTGGATATGAAATTCCATGCATGGAAGTTCATGAAAGTAATGAAGCTGCATTTAATTATGTTAAAAAAGTCTTAGAACTCTCAGGTTTCACTAGCCATGAATCTTTTGGATTATGGTATTCTGATAAACAACCACTTGATCCATCAGTTTATGAAGAATTAGAGGGATGTTTACTTCTTGATCCTGATTGTTCTGGTAATTGTGATGAAGGTGGACATTGTAATCATCTTCTTCTATTTGATATAGTTAATGAAGGATTGTTGGAGATTTTTGGAAGATCATACAGTTATTATCCTAGACCTTTGTCTTCTCTATCTTATGTTCATCCATTGCCAAGTGGAGGAGATAATGTTCTCCAAAAAGTATGGAAACTTATTAGTTGGTATCTTAATTCAACTTCTGAGCCTTATCCATCATTGGATTACTATGTTAGTAAGGATCTAGCAAAAAATGATGGGTGGATGAATCTCCAATTTGATTCTGAATGTGTTGGCCTTGAGCTAGATGATTTGATTCTTGATGATCTCTTGGAGGAAATTATCTACTCTTAA 2682 0.3527 MGKRIRDKEGAISNGINSHQSHETHPGRVWGILHIIKYHHWRHVKRRLTHRRHSGGSPEARDEIPGTSDDSGVDNMAVVLKPNTNLPNVEEKMVQSTPHEKQSIKSKIKALLNEDKYKKKGRHKRSSTCPTKSQLTRVNSVHHLEVDPLSEMLLTVENPEPVIETFQNHLAAGTLDVLSPVFSGRKPISYNDKCVECGEMFSSESLEDEKIHKHHSSWTDTKNLSSSSESLPEEKLMNAKIFTTDASPHLFKDFLDALDVINTNKDFLLKYINDPGSPLPFQIHNQQHSLNSKSRRANSISLPVCGSSSGTKDSEIGQEINQMVDDFFITKGEIQSQTPNVSMFEPLGDFYKPSTSSLHKVDQELVERDRNISSESSQVANSVKTKNFKDLRKKIKHIIEESKNEKRRISMDGIIDKIPRGNKFAKNVRKLIHEQSKVPNGEGKDSGSTSGYRNRLSSYWNNKRQLSSMRTSSLKESVNRYSQLYETCCHNEVSNEVKHPKTESLRLKTDDRCSIIKTPKSIKRFLSLPNIKSHFNQIEEPSVLLSPQNSIRKPEDRTINKSITDQKILSPTLSDHENEESILNDDQKEALVRSVSESESDVNDEIKTENSIGFDDLENLRDNECGAYNEQDIGYTTESSTLLVEANSAFSSDTSFLDCTFELENLNVLEESDQELKLDPSYYEFNTMIEKQEPKLDHSEIIDIGESFLKFGYEIPCMEVHESNEAAFNYVKKVLELSGFTSHESFGLWYSDKQPLDPSVYEELEGCLLLDPDCSGNCDEGGHCNHLLLFDIVNEGLLEIFGRSYSYYPRPLSSLSYVHPLPSGGDNVLQKVWKLISWYLNSTSEPYPSLDYYVSKDLAKNDGWMNLQFDSECVGLELDDLILDDLLEEIIYS 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02479 893 MobiDBLite consensus disorder prediction 1 24 - -
Car04g02479 893 Pfam Domain of unknown function (DUF4378) 728 889 IPR025486 -
Car04g02479 893 MobiDBLite consensus disorder prediction 49 74 - -
Car04g02479 893 MobiDBLite consensus disorder prediction 433 454 - -
Car04g02479 893 Coils Coil 388 408 - -
Car04g02479 893 MobiDBLite consensus disorder prediction 53 68 - -
Car04g02479 893 PANTHER TRM32-LIKE PROTEIN (DUF3741) 1 893 - -
Car04g02479 893 Pfam Protein of unknown function (DUF3741) 234 277 IPR022212 -
Car04g02479 893 PANTHER PROTEIN TRM32 1 893 IPR044257 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02479 Car-Chr4 44822130 44829538 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02479 23 883 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 31.590 2.81e-99 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02479 - - gmx:100807303 987.252